| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3226 |
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| Symbol | fis |
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| ID | 4605473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3819669 |
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| End bp | 3819974 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782642 |
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| Product | DNA-binding protein Fis |
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| Protein accession | YP_929098 |
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| Protein GI | 119776358 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000444169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATC AGACAACTCA CACTGAAGCT CATCCGCTTA CCGTAGGCAA AATCGAAACC
GCAAACGGCA CCATCAAGCC GCAACTGCTG CGTGATGCCG TTAAGCGCGC TGTTAGCAAC
TTCTTCGCCC AGCTGGATGG CCAGGAAGCC CAGGAAGTCT ACGAAATGGT GCTTTGCGAA
GTTGAAGCCC CTCTGCTTGA TATCATCATG CAACACACCC GCGGCAACCA AACCCGCGCA
GCCAACATGC TGGGTATCAA CCGTGGCACC CTGCGCAAGA AGCTGAAAAA GTACGGCATG
AACTAA
|
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| Protein sequence | MFDQTTHTEA HPLTVGKIET ANGTIKPQLL RDAVKRAVSN FFAQLDGQEA QEVYEMVLCE
VEAPLLDIIM QHTRGNQTRA ANMLGINRGT LRKKLKKYGM N
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