| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3215 |
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| Symbol | |
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| ID | 4605462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3806926 |
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| End bp | 3808245 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782631 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_929087 |
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| Protein GI | 119776347 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.479861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA CACACTTAAC CCAACAAAAA TTTGCCGACC TGCCCTTGTG TGACGAGGTC
AAACAGGCAC TTAACGAAAA CGGCTTCGAG CATTGCACGC CCATCCAGGC GCTTTCCCTC
CCGGTATTGC TTGAGAAAAA AGATATCGCA GGCCAGGCCC AAACGGGCAC CGGCAAGACC
CTCGCCTTTT TGGTTGCCAC CTTTAACCAT CTGCTGACCA CTCCGGTACC TGAACATCGC
CAACTGAATC AGCCCCGTGC CATTGTGATG GCGCCAACCC GCGAACTGGC GATTCAGATT
GCCAAAGACG CTACCCTGCT GTCCAAGCAC AGCGGCCTAA AGGTGGGTAT CGTTTACGGC
GGTGAAGGCT ATGAAGCCCA GCGCAAGGTG CTGGACAAGG GCGTGGATGT ACTTATTGGT
ACCACGGGCC GCATCATCGA CTATGTGCGT CAGGGCGTGA TTAATCTGGG TGCTATCCAA
GCCGTAGTAT TGGATGAAGC CGATCGCATG TTCGATCTCG GTTTTATCAA AGATATCCGT
TTTCTTTTCA ACCGTATGCC GGGCGCCAAA GAGCGTTTGA ACATGCTGTT CTCTGCCACC
CTGTCCATGA AGGTGCAGGA GCTGGCGTAC GATCACATGA ATGATCCCGT GAAGGTAGAG
ATTGCCCCGG AAGAAAAAAC TTCCCGCAAT ATCAAAGAAG AAATCTTTTA CCCTTCCATG
GAAGACAAAC TCAAGCTGCT GCACTCGCTG ATTGAAGAAG ACTGGCCCGA AAAGGCCATC
GTGTTTGCCA ACACCAAATA TCAGTGTGAA AACCTGTGGG CGAGCCTGGA GGCTGATGGC
CACCGTGTGG GCCTGCTGAC CGGTGATGTG CCGCAGAAGA AGCGTTTGAA AATCCTCGAG
CAGTTCACCC AGAGTGAACT GGATATTCTG GTGGCCACCG ACGTTGCCGC CCGTGGCCTG
CATATTTCTG ATGTGTCCCA CGTGTACAAC TACGATCTGC CCGATGACTG CGAAGACTAC
GTACACCGTA TCGGTCGTAC CGGTCGAGCC GGTCAGAAAG GGGTATCGGT GAGCTTTGCG
TGTGAGGAAT ATGCCCTTAA CCTGCCGGCC ATTGAAGATT ACATCAAGCA CAGTATCCCT
GTGACTTCTT ATGACCGTGA TGCCCTGATT GATATTCCCC CTCCGGTGAA AATCCATCGT
AAGCCCCATG CCGGTGGCCG CAACCTGCGC GATCGTAATG GTTCGCCACG TCCGTCTGGC
TCCCATCGCA GCGGCAGTGG TCGTCCTCCC CGTCATGACA GGACCCGCAG ACACTCATAA
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| Protein sequence | MSETHLTQQK FADLPLCDEV KQALNENGFE HCTPIQALSL PVLLEKKDIA GQAQTGTGKT
LAFLVATFNH LLTTPVPEHR QLNQPRAIVM APTRELAIQI AKDATLLSKH SGLKVGIVYG
GEGYEAQRKV LDKGVDVLIG TTGRIIDYVR QGVINLGAIQ AVVLDEADRM FDLGFIKDIR
FLFNRMPGAK ERLNMLFSAT LSMKVQELAY DHMNDPVKVE IAPEEKTSRN IKEEIFYPSM
EDKLKLLHSL IEEDWPEKAI VFANTKYQCE NLWASLEADG HRVGLLTGDV PQKKRLKILE
QFTQSELDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GQKGVSVSFA
CEEYALNLPA IEDYIKHSIP VTSYDRDALI DIPPPVKIHR KPHAGGRNLR DRNGSPRPSG
SHRSGSGRPP RHDRTRRHS
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