| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3170 |
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| Symbol | metL |
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| ID | 4605417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3757284 |
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| End bp | 3759677 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782586 |
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| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
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| Protein accession | YP_929042 |
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| Protein GI | 119776302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTT GTCATTTGCA TAAGTTTGGT GGCTCCAGTT TGGCGGATGC CGATTGCTAC
CGCCGCGTGG CCCATATCCT GTTGACCCAG GGCCACAGCG ACGATCTGGT GGTGGTATCA
GCCGCCGGTA AAACCACCAA CTTTTTGTAT AAGCTGCTTT CGCTGCGTGA TGCCGGTGAG
TTGTGGCAGG AAGAGTTACA GGTACTGATT AGCTATCAGC AAAACCTGAT TGAACAGTTA
CTCAGTGCCG AGCAGGCTCG CTATCTGCGT GAGCGTCTGT CGACCGACAA GGCTCAGCTG
GTCAGTCTCC TGTCATTGGC GACTCTGAAC GATTATCAGA CCAGCCATGT GGTGAGCTTT
GGTGAGCGTT GGTCCGCCAG GTTGATGGCG GCACTCTTGC GTGAATCCGG CGTGGCGGCA
AGCCACGTGG ATGCCTGCAG CATACTGGTG GCAGATGAAG GCGCCGTGCC CAATATTCGC
GAGCAGGAGT CCCGCGAAAA AGTAGCTGCC ATGCTGGCCG AACATGAAAA CGAACGCATT
GTTATCACGG GCTTTATCTG CGCCAATCCG GCCGGTGAAA CCCTGTTGCT TGGGCGTAAC
GGCTCTGACT TTTCCGCGAC CCTGATAGCC AGTCTGGCAG ATATCGAACG GGTCACCATC
TGGACTGATG TGGAAGGGGT GTTCAACGCC GACCCGAATA AGATAAACGA TGCCAAGCTG
CTCAAGAGCA TGTCACTGGC GGAGGCCGAC CGCCTGGCGC GTTTGGGTTC TCCTGTGTTA
CACAGCCGCA CTTTGCAGCC CCTGTTCAAC ACCCAGGTGA GCATGGCAGT GCGCTCAAGC
TACGCGCCTC ATACCGATTT TACTCTGGTT GCTCCAACCA GCTCTCAGGC CAGTGCCCCG
GTTGTCACCA ATCTGAGCGA AGTGGCGCTC TTTAGCCTCA CCACCCAGGC AGACACCGAT
GCCCTGTTGG CAACATTGTC TGCCTCTGGC TTAACGCCGT TGGCAAGCTG GCAGGGTTCC
AGGGGTGGGC TGGAACTGGC CTATACTCCG GAAAATCTTA AGCAGGTCAG CGCCTTTTTA
AAGGCGAACG CCGAGGCATA TGGTCTGGGC GATGTTTCCA TCAGCAACGA TTTTGGTTTG
GTGGCACTGG TGAGCGCCGA TGCGGTACTG TACCGCAAGA GTTTTGCCCG CCTGCTCAGT
CGCGAGGCCA AGCCTTTGTA TCATGATACC CTGAGCCTGG TGACTCTGGT GCCAAAGGCG
CAGGTGAACC TGCTTACGCA AAAGGTGCAC CGCCGCTGCG CCGGGCCACG CAAGCGTATT
GGCGTCATTC TCCTTGGTGT TGGCAACATC GGCGAAGCCT GGGTAAGCCT GTTTCGCCGG
GCCCAAAGCA GTCTGTGCCG TGAGCTGGAG GCGCGGATTG AACTCGTGGG GCTGGTCAGC
TCTTCCCGCG CCTACATCAA CAATGCCGGT GTGCACCTGG AGAACTGGAA AACCGAATTT
GAGGAGTACG CCACCGACTG GCAGTACGGG CAGTTGTTCG AAGCCTTATC GACACTGAAT
TGCGATGAGC TGGTTGCGCT GGACATCAGT GCCAGTGCCA GCCTGACCTT GCAGTACCCG
GAGTTTTTTG CCCGTGGTAT TCATGTGGTG AGCGCAAATA AGCTGGCCGG TTCTGGTCCC
TTGCCCTTTT ATCGCGATCT CAAGCAGCAG TTGGGTAACC GTCGTCTCTA TTGGCGCTAC
AACGCCAGCT GCGGTGCCGG TTTGCCGGTG CAGCATGCGC TTAACGATTT GCACAACAGT
GGCGACAGCG TAGAAGCCGT GGGCGGGATA TTTTCCGGTA CTCTCTGTTG GCTTTTTGAA
CACTATGACG GTCAGCGTCC TTTCTCTGAT TTGGTCATTG AGGCCCGCGG CCTGGGTATC
ACTGAGCCGG ACCCGAGGGA CGATCTTTCC GGTCGTGATA TGCAGCGCAA GCTGCTCATC
CTTGCGCGGG AAATTGGCCT GGATCTGGAG CTGGATGATA TTCAGGTCGA GTCTCCTGTA
CCGCCGCATC TGGCGGAGCT GACGCTGGAT GAGTTTCTTG CCCGCATTGA TGAACTCGAT
GCCCCCATGG CGGATGCCTT GGCGGCTGCC GCAGCCGAGG GCAAGGTGCT GCGTTATATC
GCTGCGCTGG ACAGAGCCGG TGGTCAGTTA ATGGCACGGG TAGGGTTGCA GTGGGTCGAC
AAAGCCCACC CTTATGCCAA TCTCACCCCG GGCGACAATG TGTTTGTCAT TCGCAGTACC
TTTTACCAGG GTAATCCTTT GATTATCAGG GGGCCCGGTG CCGGTCGTGA GGTAACAGCC
GCGGCTGTTC AGTCAGATCT GGTGCAGATC TGTCGGGATC TCTTGCAGGA TTGA
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| Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTQ GHSDDLVVVS AAGKTTNFLY KLLSLRDAGE
LWQEELQVLI SYQQNLIEQL LSAEQARYLR ERLSTDKAQL VSLLSLATLN DYQTSHVVSF
GERWSARLMA ALLRESGVAA SHVDACSILV ADEGAVPNIR EQESREKVAA MLAEHENERI
VITGFICANP AGETLLLGRN GSDFSATLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TQVSMAVRSS YAPHTDFTLV APTSSQASAP
VVTNLSEVAL FSLTTQADTD ALLATLSASG LTPLASWQGS RGGLELAYTP ENLKQVSAFL
KANAEAYGLG DVSISNDFGL VALVSADAVL YRKSFARLLS REAKPLYHDT LSLVTLVPKA
QVNLLTQKVH RRCAGPRKRI GVILLGVGNI GEAWVSLFRR AQSSLCRELE ARIELVGLVS
SSRAYINNAG VHLENWKTEF EEYATDWQYG QLFEALSTLN CDELVALDIS ASASLTLQYP
EFFARGIHVV SANKLAGSGP LPFYRDLKQQ LGNRRLYWRY NASCGAGLPV QHALNDLHNS
GDSVEAVGGI FSGTLCWLFE HYDGQRPFSD LVIEARGLGI TEPDPRDDLS GRDMQRKLLI
LAREIGLDLE LDDIQVESPV PPHLAELTLD EFLARIDELD APMADALAAA AAEGKVLRYI
AALDRAGGQL MARVGLQWVD KAHPYANLTP GDNVFVIRST FYQGNPLIIR GPGAGREVTA
AAVQSDLVQI CRDLLQD
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