| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3166 |
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| Symbol | |
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| ID | 4605413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3753582 |
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| End bp | 3754961 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782582 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_929038 |
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| Protein GI | 119776298 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTG TAACTGAATT AGTAAAGTCG CTGAATAGTC TGGTGTGGGG TATTCCCATG
CTGGTCATGA TCCTCGGCGT CGGCCTGTAC CTGTCCCTTG GACTCAAGCT GTTACCCATC
CTTAAGCTTG GCAAGGGCTT CAGATTGCTG TGGTCGGGCA GAACGCCCGG TCAGGGCAAA
GAGGTGAAAG GCGATGTCAG TCCTTTCAAC GCCTTGATGA CCTCGCTCTC GGCCACCATA
GGTACGGGTA ACATCGCCGG TGTGGCCACC GCCATTTTTG TGGGTGGCCC AGGCGCACTG
TTCTGGATGT GGTGTACCGC TCTGGTGGGT ATGGCCACCA AATATTCTGA GGCCGTGCTG
GCGGTGCGAT ATCGCGAAGT AGATGAAAAG GGTAACTATA TCGGTGGCCC CATGTACTAC
ATCAAGAATG GTCTTGGCAG TAAATGGACC TGGCTTGGCA CTGCGTTTGC GCTGTTTGGC
TCCTTTGCCG GTTTCGGAAT TGGCAACACA GTGCAGGCCA ACTCTGTGGC TTCGGCGCTG
ACCAGTAACT TCGGTGTGCC TGCCTGGGTG TCGGGTGTGG TGATGATGGT GCTGGTGGGG
CTGGTGCTGA TGGGCGGTAT CAAGCGTATT GCCATCGTGG CCGGTAAGCT GGTTCCCCTG
ATGACCATAT TTTATATTAC CGCCGGTATT GCCGTGTTGG TGGTGTATGC CAGTGAAATC
CCTGCCGCTT TGAGCCTGAT TATCTCCAGC GCTTTCAGTC CTGTAGCAGC TCAGGGTGGC
TTTGCCGGCG CTGCCGTGAT GGTGGCTATC CAGATGGGGG TTGCCCGCGG CGTATTCTCC
AACGAGGCGG GTCTTGGCAG TGCGCCCATT GCCCACGCGG CTGCGCAAAC CAAGAGTCCT
GTGACTCAGG GACTGGTGGG CATGCTGGGG ACCTTTATCG ATACCATCAT AGTGTGCAGC
ATTACGGGTC TTGCCATCGT GGTGTCCGGC GCCTGGACCT CAGGCGAAAA TGGCGCGGCG
CTCACCTCTT ACGCCTTCTC CCACGCCTTG CCTATTGGTG ACTATATTGT TGCCGTTGCG
CTGGCGATTT TCGCCTTTAC CACCATCCTT GGCTGGAGTG TGTACAGCGA AAAATGCGTC
CAGTATCTTT TGGGGGTGAA GGCGGTGATG CCGTTTCGTC TGATTTGGAC TCTGGTGGTG
CCATTGGGGG CCATGGGGTC GTTGGACTTT GTCTGGCTTC TGGCCGATAC CCTCAATGCC
ATGATGGCCA TCCCCAACCT GATTGCCCTG GCTCTGCTTA GCCCTGTGGT ATTCAAGTTG
ACCCGCGAGT TTTTCTCCAG CCGCGATGAG GCCAGTACCA AGTCTGTAGA AGCGGAGTAA
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| Protein sequence | MEAVTELVKS LNSLVWGIPM LVMILGVGLY LSLGLKLLPI LKLGKGFRLL WSGRTPGQGK
EVKGDVSPFN ALMTSLSATI GTGNIAGVAT AIFVGGPGAL FWMWCTALVG MATKYSEAVL
AVRYREVDEK GNYIGGPMYY IKNGLGSKWT WLGTAFALFG SFAGFGIGNT VQANSVASAL
TSNFGVPAWV SGVVMMVLVG LVLMGGIKRI AIVAGKLVPL MTIFYITAGI AVLVVYASEI
PAALSLIISS AFSPVAAQGG FAGAAVMVAI QMGVARGVFS NEAGLGSAPI AHAAAQTKSP
VTQGLVGMLG TFIDTIIVCS ITGLAIVVSG AWTSGENGAA LTSYAFSHAL PIGDYIVAVA
LAIFAFTTIL GWSVYSEKCV QYLLGVKAVM PFRLIWTLVV PLGAMGSLDF VWLLADTLNA
MMAIPNLIAL ALLSPVVFKL TREFFSSRDE ASTKSVEAE
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