| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3132 |
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| Symbol | |
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| ID | 4605379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3720007 |
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| End bp | 3721704 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639782548 |
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| Product | metal-dependent amidohydrolase with the TIM-barrel fold |
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| Protein accession | YP_929004 |
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| Protein GI | 119776264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCTC GCCTTTCCTT GCACTCTGCT TACCCCAGTA CCCTGCCACG CCGCACCCTG
CTCGCTTCCC TGTTGCTGGT TTGCTGTCAG GGCGTCGCCA CTGCAGCCAC CGTCAAACTG
GAAAATATTC GCGGTTACGG TTTTGATGAT GAACGTCAGT TGGTCACCTT CGACACCCTC
GCCTATGACG ATGTCACCGG CAAGGTGCTG GCACGGGGCA AGGAGGCGCA GTCGCTGACC
ACAGACCAGG TGCACAATGG TGCGGGGAAG ACGCTGTTGC CGGGGCTTAT CGACGGTCAC
GGCCATGTGC TGGGACTGGG CCAGGGCCTG AGCCAGGTTG AACTGCGGGA GACTCGCACC
GAAGCCGCTG CTGCCAGTCT GGTAAGCAGC TTTGCCCAGG CTCATCGCGA GCAGCGCTGG
ATATTGGGGC GGGGCTGGAA TCAGGAACTC TGGGACAGCC GCGCCTATCC AACCAAGGCC
TCGCTGGATG CCCTGATAAA CGACAGACCC GTTTGGCTAC GCCGTGTTGA CGGCCACGCA
GGTTGGGCCA ACAGCAAGGC CCTTGCCCTG GCGGGCATAG GCCGGGACAC ACTGGACCCG
GATGGGGGTC AAATCATCAA GGATGCCAAG GGTGAACCCA CGGGCGTGTT GGTGGATAAC
GCCATGGCGC TGCTGGAAAA CCAGATCCCC GAGCCCGCAA AAGCAGAACG ACTTGCCGCC
TTTACCACCG CCTTTGACCA CCTGCTCTCC CTCGGTATCA CAGCCACCCA TGATGCGGGC
ATCAGCGCCG CCGAGCTGGC CGATTATCAG GATTTGCGCC AACAACAGCG GTTACCGGTG
CGGATATATG CCATGCTGTC CGCCGCCGAT CCGGCGCTGG ATTCCTGGCT GAAGCAGGGC
CCGATTCTGG ATGAAGACGA GCGACTGGTG GCCCGCTCGG TGAAAATTTA CAGCGATGGC
GCACTTGGCA GCCGCGGAGC GGCGCTGCTG GCCCCATACA GTGACAGACC CGGTGAAACC
GGGCTGCTGG TCACGCCGGA GCCTGAGCTG GGAAGCCTGA TAAAAGCCAC GGTTGCCGCT
GGCTTTCAGG CCAATGTGCA TGCCATTGGT GACAGGGCCA ATCGCATGGT GCTGGATAAA
TTTGCCCAGC TGGATGACAA AACCCGCGAG GCCGGGCGTC ATCGCATCGA ACACGCCCAA
ATCATCGACC CCAAGGATTT GCCCCGCTTC GCCACGCTCA AGGTATTGCC CTCCATGCAA
CCCACCCATG CCACCTCCGA CATGAACATG GCCGGAGATC GCCTCGGTGA GCAGCGTCTG
CGCGGTGCCT ATGCCTGGCG TACCCTGGTG GATATGGGCA GTCCCATCGT TGGCGGCTCC
GACTTCCCGG TGGAGCTGGC CAATCCTTTC CACGGCCTCC ATGCCGCCGT GACCCGCCAG
GATCAACGCA ATCTGCCCGA AGGTGGCTGG CGCCCGGCAG AAAAGCTGAC CCTGGCAGAG
GCTCTGCGCG CCTTTACCCG GGATGCGGCC TATGGCGCCT TTCAGGAGCA AAAAATGGGC
AGCCTGACAC CGGGCAGCTT TGCCGATTTT ATTCTGGTGG ACAGAGATAT ATTCGCCATC
GTGCCTGAGC AGCTATGGCA AACCCGGGTG CTTGAGACCC ATGTGGCGGG TAAACAGGTC
TATGCTTTGG GACAATAA
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| Protein sequence | MVARLSLHSA YPSTLPRRTL LASLLLVCCQ GVATAATVKL ENIRGYGFDD ERQLVTFDTL
AYDDVTGKVL ARGKEAQSLT TDQVHNGAGK TLLPGLIDGH GHVLGLGQGL SQVELRETRT
EAAAASLVSS FAQAHREQRW ILGRGWNQEL WDSRAYPTKA SLDALINDRP VWLRRVDGHA
GWANSKALAL AGIGRDTLDP DGGQIIKDAK GEPTGVLVDN AMALLENQIP EPAKAERLAA
FTTAFDHLLS LGITATHDAG ISAAELADYQ DLRQQQRLPV RIYAMLSAAD PALDSWLKQG
PILDEDERLV ARSVKIYSDG ALGSRGAALL APYSDRPGET GLLVTPEPEL GSLIKATVAA
GFQANVHAIG DRANRMVLDK FAQLDDKTRE AGRHRIEHAQ IIDPKDLPRF ATLKVLPSMQ
PTHATSDMNM AGDRLGEQRL RGAYAWRTLV DMGSPIVGGS DFPVELANPF HGLHAAVTRQ
DQRNLPEGGW RPAEKLTLAE ALRAFTRDAA YGAFQEQKMG SLTPGSFADF ILVDRDIFAI
VPEQLWQTRV LETHVAGKQV YALGQ
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