| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3080 |
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| Symbol | |
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| ID | 4605327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3657277 |
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| End bp | 3658059 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782496 |
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| Product | hypothetical protein |
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| Protein accession | YP_928952 |
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| Protein GI | 119776212 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.200966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCTAA TTGATGCAGT TGCACGCCTG GGGCGTGGCG CCATAAATCA GGTGGCCGGC
ATGGGCCGGG CGGGCGTGAT GTTGTGGGGC GCCATCTTTT CCGTCCCCAA ACCCCAAAAA
GGTTTTCCGC TGCTGGTAAA GCAGCTTTAT GTGGTCGGTG TGCAGTCGCT GATCATTATT
CTGGTGTCAG GCCTCTTTAT CGGCATGGTA TTGGCGCTGC AGGGTTATAC CATTCTGGTG
GATTTTGGTA CCGAAGAAAG TCTGGGCCCT ATGGTGGCGC TGAGTTTGCT GCGGGAGCTG
GGGCCTGTGG TCACAGCATT GCTGTTTGCC GGAAGGGCAG GGTCGGCGCT GACTGCTGAG
ATTGGCCTGA TGAAGAGCAC AGAGCAGCTC TCAAGCCTTG AAATGATGGC CGTTGATCCG
CTGCGGCAAA TTATCGCTCC CCGATTCTGG GCCGGTGTTA TCAGTATGCC GCTGTTGGCG
CTGATGTTTA CCGCTGTGGG TATTTGGGGC GGTCATATCG TGGGCGTAGA GTGGAAAGGC
ATCGACAATG GCGCCTTCTG GTCGATTTTA CAGGCGTCGG TTGAGTGGCG TCAGGACATA
GTAAACTGTT TGATTAAAAG CCTGGTGTTT GCCGTAGTGG TGACCTGGAT TGCTCTGTAC
CGCGGTTACG AAGTGGTGCC CAACCCGGAA GGGATAAGTA AGGCCACTAC TTCTACCGTG
GTGCAATCGA GTCTTGCCGT ACTGGCATTG GATTTTTTGC TGACCGCCCT CATGTTTGGC
TAA
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| Protein sequence | MALIDAVARL GRGAINQVAG MGRAGVMLWG AIFSVPKPQK GFPLLVKQLY VVGVQSLIII
LVSGLFIGMV LALQGYTILV DFGTEESLGP MVALSLLREL GPVVTALLFA GRAGSALTAE
IGLMKSTEQL SSLEMMAVDP LRQIIAPRFW AGVISMPLLA LMFTAVGIWG GHIVGVEWKG
IDNGAFWSIL QASVEWRQDI VNCLIKSLVF AVVVTWIALY RGYEVVPNPE GISKATTSTV
VQSSLAVLAL DFLLTALMFG
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