| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3058 |
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| Symbol | |
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| ID | 4605305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3633749 |
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| End bp | 3635155 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782474 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_928930 |
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| Protein GI | 119776190 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000123089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.262766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGG AAGCCGCCTT TAAACCAAAG GGCAAGTTAA AAGATGCCCA GGTTGAAGCC
ATCAAAATGC CGCCGCATTC GATAGAGGCC GAGCAATCGG TGCTTGGCGG CCTGATGTTG
GATGCTGAGG CTTGGGACAA AGTGGCCGAA GCCGTGGTTC GTGAAGACTT TTATTCCCGC
TCTCACCGAT TGATTTTCTC TGCCATGCAA AAGCTGGTGG AGCAGGGCCA GCCCCTGGAT
TTGATTACTG TGTCGGAACA GCTCGAACTG AATAACGAGC TGGACGATGC CGGCGGTTTT
GCCTATTTAG GTGAGATTGC CAAAAACACT CCCAGCGCCG GTAACATATT GTCTTACGCC
GAAATTGTAC GTGAGCGCGC CGTGGTGCGG GAAATGATTC GGGTTGCCCA TGAGATTGCC
GACGCGGGTT ACAACCCCGA AGGTCGTGAC TCCAGTGCCT TGTTGGATCT GGCGGAAACC
AAGGTGTTCA AGATTGCCGA GCAGCGGGCC AATGCCAACG AAGGGCCCGA AGATATCAAG
GCAATCCTCG AAAAAACCGT CGATAAAATC GAGCAGCTTT ATAACAACCC CCACAATGGC
GTGACCGGGG TATCCAGCGG CTTTTCGGAT CTCGACCGTA TGACCGCAGG TTTTCAAAGC
GGTGACCTTG TGATTGTGGC GGCACGTCCG TCCATGGGGA AAACCACCTT CGCCATGAAT
CTCTGCGAAT ACGCCGCCAT GAACGAAGAC AAACCGGTAC TGATTTTCAG TCTCGAGATG
CCCTCAGAAC AGATCATGAT GCGTATGCTG GCGTCCCTTG GCCGCGTTGA TCAAACCAAG
GTACGTACCG GTCAGCTGGA TGATGAGGAT TGGGCGCGGG TGTCTTCCAC CATGGGGTTG
ATGCTCGAGC AGGGCAAGAT GTACATCGAT GACAGTTCTG GCCTGACCCC AACCGAGGTA
CGCAGCCGCG CCCGCAGGGT GGCCCGTGAA TGGGGTGGTC TGTCGATGAT CATGGTGGAC
TACCTGCAGC TGATGCAGGT ACCGGCGCTG GCCGATAACC GTACCCTGGA AATTGCCGAA
ATTTCCCGCT CGCTCAAGGC ACTTGCCAAA GAACTGGAAA TCCCTGTGAT TGCCCTGTCA
CAGCTTAACC GCTCGCTGGA ACAAAGGGCC GACAAACGCC CTGTGAACTC GGATCTGCGT
GAATCCGGCT CTATCGAGCA GGATGCGGAC CTTATCATGT TTATCTACCG GGACGAGGTA
TACAATAACG ATTCCCAGGA TAAAGGCACG GCCGAAATCA TTATCGGTAA GCAGCGTAAC
GGCCCCATTG GCCGGGTGCG TCTGACCTTT CAGGGGCAAT TCTCCCGCTT TGACAATTAT
GCCGGCCCTC AGTTTGAAGA AGACTGA
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| Protein sequence | MSQEAAFKPK GKLKDAQVEA IKMPPHSIEA EQSVLGGLML DAEAWDKVAE AVVREDFYSR
SHRLIFSAMQ KLVEQGQPLD LITVSEQLEL NNELDDAGGF AYLGEIAKNT PSAGNILSYA
EIVRERAVVR EMIRVAHEIA DAGYNPEGRD SSALLDLAET KVFKIAEQRA NANEGPEDIK
AILEKTVDKI EQLYNNPHNG VTGVSSGFSD LDRMTAGFQS GDLVIVAARP SMGKTTFAMN
LCEYAAMNED KPVLIFSLEM PSEQIMMRML ASLGRVDQTK VRTGQLDDED WARVSSTMGL
MLEQGKMYID DSSGLTPTEV RSRARRVARE WGGLSMIMVD YLQLMQVPAL ADNRTLEIAE
ISRSLKALAK ELEIPVIALS QLNRSLEQRA DKRPVNSDLR ESGSIEQDAD LIMFIYRDEV
YNNDSQDKGT AEIIIGKQRN GPIGRVRLTF QGQFSRFDNY AGPQFEED
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