Gene Sama_3049 details

Gene Information

• Locus tag: Sama_3049
• ID: 4605296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella amazonensis SB2B
• Kingdom: Bacteria
• Replicon accession: NC_008700
• Strand: -
• Start bp: 3627076
• End bp: 3627816
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639782465
• Product: hypothetical protein
• Protein accession: YP_928921
• Protein GI: 119776181

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00345897
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.661514
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAAA CCATTCTGGC TGCCTCACTG CTTTCAGCGT TGGCTGCGTT TTCGGCCAAC 
GCGGCCACTG TTGTTGGTTT TAAAGTCGGT GCCGATTACT GGCATGCTGA TGCCAAAGGC 
AATGTGCCTG ACGATGCTGG TAACCTGCAC GGGTTTGATT ACGACACATC GGGTCAGACA 
AGTGTTTGGT TTGCCGTTGA GCATCCAGTG CCCTTGCTGC CTAACCTGCT GATCCGTGAA 
AATCGCCTCG AAGAAGATGG CTTTAACGCC GATGCAACTC TGGCCTTCGG TGGTATTCCT 
TTCAATGGTG AACTCTATAG CACCATGGAT CTGAGCAATA CCGACTTTGT GCTTTACTAC 
GAGCTGCTGG ACAACGATAT AGTGTCGCTG GATGTGGGCG GTGCCTACAA AAAGATGAAC 
GGTTCACTGC GCATCAGCAA TGCCTCGGGC GTTGCTGCGC AAAAGGACTT TACCGATGGC 
ATTATCATGG GTTACGCCAG TGCCGTGGTG GGTATGCCTG GTCTGGGTCT CTATGGCTTT 
GCCGACCTGA TGGCGGGGTT GGATGAAAGC CAGGTGTACG ATTACAGTGT GGGTCTGGGC 
TGGGAGTTTG ACGGTATTGC ACTGGATACC CGTATCCGCG CTGGCTACCG TGAGTTCAGT 
TTCGATGTGA ATGGCTTCGA TGGCATTAGC ACTGACAGTA GCTTCAAAGG CTATTTTGCC 
GGTGTGGAAC TGCTTTTCTA A 

 

Protein sequence

MKKTILAASL LSALAAFSAN AATVVGFKVG ADYWHADAKG NVPDDAGNLH GFDYDTSGQT 
SVWFAVEHPV PLLPNLLIRE NRLEEDGFNA DATLAFGGIP FNGELYSTMD LSNTDFVLYY 
ELLDNDIVSL DVGGAYKKMN GSLRISNASG VAAQKDFTDG IIMGYASAVV GMPGLGLYGF 
ADLMAGLDES QVYDYSVGLG WEFDGIALDT RIRAGYREFS FDVNGFDGIS TDSSFKGYFA 
GVELLF