Gene Sama_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3024 
Symbol 
ID4605271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3598351 
End bp3599658 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content54% 
IMG OID639782435 
ProductGTP-binding protein HflX 
Protein accessionYP_928896 
Protein GI119776156 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.9061e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGATC GTTATGAGGC GGGAGAAACA GCGGTTCTTG TCCATATCGA TTTTACCGAC 
GAAGGCAGTC GGGAAGATCT CGCCGAATTG CAGTTATTGG TGGAATCGGC GGGTGCACGC
TCCGTTGGTG TTATTACAGG AAGCCGTCGC GCGCCTGACC GCAAGTTTTT TGTGGGTACA
GGCAAGGCTG AAGAGCTGGC TGCCATGGTG GCCGCGACCG ATGCAAATGT AGTGATTTTT
AACCATGCCC TGAGTCCGGC TCAGGAGCGG AATCTGGAGC ACCTGTGTCG TTGTCGGGTG
CTCGACAGGA CAACCCTGAT CCTGGATATT TTCGCTCAAC GTGCCCGGAC CCACGAAGGT
AAGTTGCAGG TGGAGCTAGC GCAATTGCGC CACATGTCAA CGCGCCTCGT GCGGGGCTGG
ACTCACCTTG AGCGCCAGAA GGGCGGTATT GGTCTGCGTG GTCCAGGTGA AACTCAGTTG
GAAACCGACC GCCGCTTGCT GCGGGGACGG ATCAAGAATA TTAACCGCCG TCTGGAGAAG
GTAGACAAAC AGCGGGAGCA AAGCCGCAGG GCAAGGCAAC GCAGTGACAT GGCAGCGGTT
TCTCTGGTTG GTTATACCAA CGCAGGAAAG TCCACCTTGT TCAATACGTT GACCAGCGCT
GAGGTGTACG CCGCCGATCA ACTGTTTGCG ACTCTGGATC CCACGCTGCG AAAACTCGAG
TTGCCTGACG GTGCCGCGAT TCTCGCAGAC ACAGTAGGAT TCATCCGTCA CCTTCCACAT
GACCTGGTTG CCGCCTTCAA GGCCACGCTG CAAGAGACCC GCGAAGCGGA TCTTTTGTTA
CATGTAATTG ATTGTGCAGA TGAAAAGATG CGCGACAATA TAGAGCAAGT GCAGGCGGTA
CTGAAGGAAA TCGACGCCGA TGAGATACCT CAACTCATCG TGTGCAACAA GATTGACCTG
GTTGAAGGCA TTAAACCCGC CATCGATCGG GATGATACCG GAAAGCCTTT CCGGGTCTGG
TTGTCTGCCC AGCAAAACCA AGGCTTGGAT TTGCTCCGGC AGGCGGTTCA GGAGTTGGTT
GGCAATGTCA TTGCCGAGCT AACCCTGAAA ATCCCGGCAA CCGCCGGGCA TTATCTTGGC
CAGTTTTATC GACTGGATGC GATACAGCAG AAAGAGTATG ACGATCTGGG GAACTGTATC
TTGTCTGTTC GTTTGCCTGA TGCCGATTGG CGCAGGCTGG CTAAACAGAG TCAAGGTGAG
TTGGAAACCT TTATTGTCGA TACAGCGACT GATAGGGTAG TTTGTTAA
 
Protein sequence
MFDRYEAGET AVLVHIDFTD EGSREDLAEL QLLVESAGAR SVGVITGSRR APDRKFFVGT 
GKAEELAAMV AATDANVVIF NHALSPAQER NLEHLCRCRV LDRTTLILDI FAQRARTHEG
KLQVELAQLR HMSTRLVRGW THLERQKGGI GLRGPGETQL ETDRRLLRGR IKNINRRLEK
VDKQREQSRR ARQRSDMAAV SLVGYTNAGK STLFNTLTSA EVYAADQLFA TLDPTLRKLE
LPDGAAILAD TVGFIRHLPH DLVAAFKATL QETREADLLL HVIDCADEKM RDNIEQVQAV
LKEIDADEIP QLIVCNKIDL VEGIKPAIDR DDTGKPFRVW LSAQQNQGLD LLRQAVQELV
GNVIAELTLK IPATAGHYLG QFYRLDAIQQ KEYDDLGNCI LSVRLPDADW RRLAKQSQGE
LETFIVDTAT DRVVC