| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2953 |
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| Symbol | |
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| ID | 4605200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3514745 |
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| End bp | 3516139 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782364 |
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| Product | sodium:alanine symporter family protein |
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| Protein accession | YP_928825 |
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| Protein GI | 119776085 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.206004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC ACGCACTGCT GACGCAGTTG AACGCTATTG TTTGGGGTCC TGTGACCCTG
TGTTTGTTGG TGGGTACCGG TGTGTACTTC ACCGTTCGTT TAAAGCTGTT GCAGCTGGTC
AAATTACCCC TCGCCCTGTC ACTGCTCTTT AAACCCGCCT CAGGGAAGGG GGAGCTGTCG
TCCTTTGGGG CGCTTTGCAC CGCACTCTCG GCCACCATAG GCACGGGCAA CATAGTGGGG
GTCGCCACCG CCATCAAGCT CGGTGGCCCG GGTGCGCTGT TTTGGATGTG GGTGGCGGCC
TTTTTTGGCA TGGCCACCAA ATACGCCGAG TGTTTGCTGG CGCTCAAATA CCGCACCACC
GACGCCAGGG GCAATATCGC CGGTGGCCCC ATGTATTACA TTGAACGCGG ACTTGGCCTG
GGCTGGCTCG CCAGGCTCTT TGCCATTTTC GGGGTAGGTG TGGCCTTTTT CGGTATAGGT
ACCTTCGCCC AGGTCAATGC CATCAGCGAT GCCATGACGG TGGCCTTTGC CGTGCCCACC
TGGGTGACTG CCAGCGTGCT GACCCTGCTG GTGGCGGCCG TGACGTTAGG CGGCGTTAAG
CGCATCGCTT CGGTTGCCCA AACTCTGGTG CCCGCCATGG CCATCGGCTA TGTGCTGGCT
TGCCTTTGGG TACTGCTGAG TCTCCATGAC GCCATAGTGC CGGCCCTTTC TTTGGTGGTG
AATGGGGCCT TTACCCCGGT TGCCGCCGGG GGCGGCTTTT TGGGGGCGAC TGTGGCGCTG
GCGATTCAAA CCGGTATCGC CCGTGGGGTA TTCTCCAACG AGTCCGGCCT TGGCAGCGCA
CCCATTGCGG CGGCAACTGC ACGCACCAAA GAGCCGGTGG AGCAGGGGCT GGTGAGCATG
ACTGGCACCT TTTTCGATAC CCTGATTATC TGCACCATGA CAGGATTGGT GCTTATCATC
ACTGGTGTAT GGAGTGGCGA CAGCGCCGGA GCAGCCATGA CCAGCGCTGC TTTTTCCGCG
GCGACAAACC CCTTGCTGGG GCAATATCTG GTGACAGTGG CGCTGGTGTG TTTTGCCTTT
ACCACCATTC TGGGCTGGAA CTACTACGGC GAGCGCTGCT GGAGCTATCT CACCGGGGGC
CGTTATGCCG GTCTGTACCG GCTGGTCTTC TTGCTGCTGA TTGCTGGCGG TGCCTTTATC
AAGCTCGACC TGATATGGCT CCTTGCTGAC ATCGTCAATG GCCTGATGGC CATCCCCAAC
CTGATAGCGC TGATTGGCCT GCGCAGCGTC ATCCTTGCCG AAAGTCAGCG CTATTTTGGC
ATGCTGGCCA TGCCGGGCGG GAACGCTGCG CTGCCAAGCC GTGCAAAAGA GGCTGAAGAT
GGCCTGGTGA GTTAA
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| Protein sequence | MDFHALLTQL NAIVWGPVTL CLLVGTGVYF TVRLKLLQLV KLPLALSLLF KPASGKGELS
SFGALCTALS ATIGTGNIVG VATAIKLGGP GALFWMWVAA FFGMATKYAE CLLALKYRTT
DARGNIAGGP MYYIERGLGL GWLARLFAIF GVGVAFFGIG TFAQVNAISD AMTVAFAVPT
WVTASVLTLL VAAVTLGGVK RIASVAQTLV PAMAIGYVLA CLWVLLSLHD AIVPALSLVV
NGAFTPVAAG GGFLGATVAL AIQTGIARGV FSNESGLGSA PIAAATARTK EPVEQGLVSM
TGTFFDTLII CTMTGLVLII TGVWSGDSAG AAMTSAAFSA ATNPLLGQYL VTVALVCFAF
TTILGWNYYG ERCWSYLTGG RYAGLYRLVF LLLIAGGAFI KLDLIWLLAD IVNGLMAIPN
LIALIGLRSV ILAESQRYFG MLAMPGGNAA LPSRAKEAED GLVS
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