| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2903 |
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| Symbol | |
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| ID | 4605150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3450625 |
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| End bp | 3451317 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782314 |
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| Product | NrfC, Fe-S-cluster-containing hydrogenase component 1 |
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| Protein accession | YP_928775 |
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| Protein GI | 119776035 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.567692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAGTTT CCAAACGCCA GTTTCTCAAG GGGGTTGGGG CGCTGCTGAC CGGTGTCTCT
GTGTATGGAG CCACCCGCAC GCTCCAGGCC GATTCCCTGC TGCAACCCGA GGCGGAAAGC
GAAACCAAAT ATGCCATGGT GCACGATGAA AATGCCTGCA TCGGCTGTAA TGCCTGTGTC
CAGGCGTGCC GTGAGACCAA TCAGATCCCC GAGGGTGTCA CCCGGGTGAA GATAGAGCGC
AGGGGCCCCT TTGGTGAGTA TCCTAACCAG AGCTACCGCT TCAGCCGTGT CTCCTGTCAG
CATTGCGAAG CCGCGCCCTG TGTGCGGGTC TGCCCCACAG GCGCTGCCTA TATCGACAAA
GAGACCGGCA TTGTGGCGGT CAACAGCGAC CGCTGCGTGG GTTGCCAGTA TTGCATTGCC
GCCTGCCCCT ATCAGGTCAG GTATATCCAC CCCGAGACCC GCACCGCCGA CAAATGCGAT
TTCTGTCAGA AGAGTCGCCT GGCTCAGGGG CTGCAACCTG CCTGTGTCGA AGCCTGCCCC
ACCAAGGCAC TGACCTTCGG CAATCTCAAG GATCCCGAGT CGGAATTGGT CAAGTTGCTT
AAAGCCAAGC CCAGCTACCG CGCCAAGGTG GACCTGGGGA CCCGGCCCAA GCTGTTCCAT
ATTCAAACCA TAGATGGGGA GATAATGCTA TGA
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| Protein sequence | MLVSKRQFLK GVGALLTGVS VYGATRTLQA DSLLQPEAES ETKYAMVHDE NACIGCNACV
QACRETNQIP EGVTRVKIER RGPFGEYPNQ SYRFSRVSCQ HCEAAPCVRV CPTGAAYIDK
ETGIVAVNSD RCVGCQYCIA ACPYQVRYIH PETRTADKCD FCQKSRLAQG LQPACVEACP
TKALTFGNLK DPESELVKLL KAKPSYRAKV DLGTRPKLFH IQTIDGEIML
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