Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2882 |
Symbol | |
ID | 4605129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3422843 |
End bp | 3423379 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639782293 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_928754 |
Protein GI | 119776014 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAAA CTCTTATTCT TTTTTCCACC GTCCATGGTC AGACCCGCAA GATTTGCGAT CGCATTGCCG AGGTGATGCG CGGCCTTGAC CACGAGGTGA CCCTGATGCC TCTGGATCAG GCGCCGAGTC TGGAGGGATT CGACAAGGTA GTGTTGGGGG CCAGCATTCG CCATGGCAAA CACAACAGCG CCGTGTACCA GTTTATCGAG CAAAATCTGG ACGCGCTGCG AAGCCGTGCC GGTGCCTTTT TCTCTGTCAG TCTGGTGGCC CGAAAGCAAG CCAAGAATAC GGCGGCCACC AATCCCTATA TGCAGGACTT TTTAGCTAAA TCTCCCTGGC GCCCTGAGTT GCTGGAGGTA TTTGGCGGTA ACCTGCATTA TCAGGGCTAT AGCGCCATGG ATAGAAATAT CATCAGATTT ATCATGTGGT TGACCAAGGG ACCAACCGAC CCCAATACCA AGGTGGAGTA CACCGACTGG CAAAAAGTTG ATAGGTTTTC CCGAGAGATA GCATCTATGG AAATTTTATC CCGATGA
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Protein sequence | MSKTLILFST VHGQTRKICD RIAEVMRGLD HEVTLMPLDQ APSLEGFDKV VLGASIRHGK HNSAVYQFIE QNLDALRSRA GAFFSVSLVA RKQAKNTAAT NPYMQDFLAK SPWRPELLEV FGGNLHYQGY SAMDRNIIRF IMWLTKGPTD PNTKVEYTDW QKVDRFSREI ASMEILSR
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