Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2861 |
Symbol | |
ID | 4605108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3398749 |
End bp | 3400263 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782272 |
Product | response regulator receiver protein |
Protein accession | YP_928733 |
Protein GI | 119775993 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTAATG GTGTAACCCA TCGAGGGCTC GCAAATGGCG GGCCCTTACG TTATCGTGTA GTGGCTGAAT TAACCAAGAT GAATCAAATG GATAAGATAT TAATCGTCGA CGACAATCTG GATGTTTGCC AGGCACTTTC ACTGATGCTT GAACTGAACG GTTACAAAAG CCATTGCGTG CAGAGTCCTG AAATGGCGCT CGATGCCATT GAGAAGCACG AGTTTTCGCT GGTGATCCAG GACATGAATT TCACCCGCGA TACCACCAGC GGTGAGGAAG GCCGGGAACT GTTTCATGCT CTGCGTGAGT GTCGTCCGGG GATCCCCATC ATACTTCTGA CTGCCTGGAC CGAGCTTGAA ATGGCCGTGG AGCTGATGAA AGCCGGTGCC GCCGATTATT TGGGTAAGCC CTGGGACGAT GCCAAGTTGC TCACCAGCAT TGGCAACCTG ATTTCGCTGC ACAAACTGTC ACGGGAAAAC GGCGAACTGA AGCGCCAGAA GGCCGAGCGC ACCGCGGTTA TTCACGAGGC AAACCTCTGT GGCCTGGTGT TTGGCAGCAC GGCCATGGAG CGTTGCGTGG ATCTGGCGCT GCAACTGGCC AAATCGGACG TATCCGTGCT GATCACTGGT CCCAACGGCG CAGGTAAAGA TCGCCTGGCC GACATTCTCC ATGCCAATTC GCCATTAAAA GACAAACCCT TTATCAAGGT GAATGTGGGC GCCTTGCCCA TGGAGCTGAT GGAGGCCGAA CTCTTTGGCG CCGAGGCTGG CGCCTTTACC GGCGCCACCA AGTCCCGTAT CGGCCGCTTT GAAGCCGCCA ATGGTGGCAC CCTGTTTTTG GACGAGATTG GCAATCTGCC TTTGAGCGGC CAGGTGAAAT TGCTGCGGGT GCTGCAAACC GGAGAATTTG AACGCCTTGG CAGCCACCAG ACCCGTAAAT GTAAGGTCAG GGTGCTCAGC GCCACCAATG CCGATTTGCG TCAGGATATT CAGACTGGGC GCTTTCGTGA AGATCTTTTC TACCGCCTGA ACGTGGTGGA GCTGGCATTG CCGCCCCTGT GCGAGCGTCG CGATGATGTG CTGCCCCTGG TGCAACACTT TACCCGGGGA CGGGCATTGG ATGCCTCTGC CAAGGCGGCG CTGCTGGCCC ATTCCTGGCC GGGCAATGTG CGTGAGTTGG AGAACGCCTG TAAGCGGGCG GATATCCTGG CCAGAGGCGA GATGCTGAGT GCGGTGGATT TTGGTTTGAT GCCGACACAA ACGCCGCAAC CCGCGGTAAA TCAGTCCGGG ATTTCTTCGA ATGAGGCGCA TCATAACGAG CCCTTTAACA CTCTTCTTCC CGAGTCAGAA CCGGTTAACA CAGCGCCAAA CCGAAGCGAG ATAGAGGCCG CCATTACCGC CCACAATGGG GTGATTGCCA GGGTGGCCAA ATCCTTTGGA CTCAGCCGTC AGGCGCTGTA TCGCCGCATG GAGAAGTTCG GCATTGAGGT GAAGTCCTCC AAGGCCGAAG GATAA
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Protein sequence | MSNGVTHRGL ANGGPLRYRV VAELTKMNQM DKILIVDDNL DVCQALSLML ELNGYKSHCV QSPEMALDAI EKHEFSLVIQ DMNFTRDTTS GEEGRELFHA LRECRPGIPI ILLTAWTELE MAVELMKAGA ADYLGKPWDD AKLLTSIGNL ISLHKLSREN GELKRQKAER TAVIHEANLC GLVFGSTAME RCVDLALQLA KSDVSVLITG PNGAGKDRLA DILHANSPLK DKPFIKVNVG ALPMELMEAE LFGAEAGAFT GATKSRIGRF EAANGGTLFL DEIGNLPLSG QVKLLRVLQT GEFERLGSHQ TRKCKVRVLS ATNADLRQDI QTGRFREDLF YRLNVVELAL PPLCERRDDV LPLVQHFTRG RALDASAKAA LLAHSWPGNV RELENACKRA DILARGEMLS AVDFGLMPTQ TPQPAVNQSG ISSNEAHHNE PFNTLLPESE PVNTAPNRSE IEAAITAHNG VIARVAKSFG LSRQALYRRM EKFGIEVKSS KAEG
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