Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2852 |
Symbol | |
ID | 4605099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3391692 |
End bp | 3392363 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782263 |
Product | hypothetical protein |
Protein accession | YP_928724 |
Protein GI | 119775984 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.272054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAAC TGCCTTTTTC TGCAGCCGTC ACCGCCCCTC TTTTGGCGCT GATGCTGACA GCCTGCGGCG CCACCGACAA ACCCGCCGCC GACAAGACGC CAACCAATGC CGGGCAAACA GCCGAAACTC CGGCGCCGGA AACCGCAGCC GCACCGGCGG CCCCGACAGC GCCAGCCGCG CCTGAAGTTA AGGTTGCTCC CGCTCCCAAA GCGGCGCCGG TGGCAAAAGC CGAGAAGATC GCAGGCGATG GCGTGCTCTA TATCCTGACT GACATTCCCT ATAACCCCGA GAGCAACATA GTCGATAAGG TCGAGCTGGA ATGCACCGAG CTTGGCCGCC AGTTTGCCGA TTCCATCGTG AAATACGGTA ACAAGCAAAA ACTGAAAATC AAGCGGGTAG ACGAGCTGCC AGCTCAGGGC AATGCGGTCA AAATCACCAT CGACAATGTG TACAGCGAAG GCAACGCCAA CCCCTTTAAC CCCCATCGCA AGCACGTTGC GGCTACCGCA GTGTTGGTGA TTGATGGCGA AGAAACCAAG ATCAGTGACT TCTCCCGTTT TTCCACCGGC GGTATGTGGG GCGGCTTCAA GGGCTCCTGC AGCGTGCTCC AGCACACGGT AAACACCCTG GGCAACGATG TTGCCAAGTG GCTGAAGAAA TACGCGGGCT AA
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Protein sequence | MHKLPFSAAV TAPLLALMLT ACGATDKPAA DKTPTNAGQT AETPAPETAA APAAPTAPAA PEVKVAPAPK AAPVAKAEKI AGDGVLYILT DIPYNPESNI VDKVELECTE LGRQFADSIV KYGNKQKLKI KRVDELPAQG NAVKITIDNV YSEGNANPFN PHRKHVAATA VLVIDGEETK ISDFSRFSTG GMWGGFKGSC SVLQHTVNTL GNDVAKWLKK YAG
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