Gene Sama_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2852 
Symbol 
ID4605099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3391692 
End bp3392363 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID639782263 
Producthypothetical protein 
Protein accessionYP_928724 
Protein GI119775984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.272054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAC TGCCTTTTTC TGCAGCCGTC ACCGCCCCTC TTTTGGCGCT GATGCTGACA 
GCCTGCGGCG CCACCGACAA ACCCGCCGCC GACAAGACGC CAACCAATGC CGGGCAAACA
GCCGAAACTC CGGCGCCGGA AACCGCAGCC GCACCGGCGG CCCCGACAGC GCCAGCCGCG
CCTGAAGTTA AGGTTGCTCC CGCTCCCAAA GCGGCGCCGG TGGCAAAAGC CGAGAAGATC
GCAGGCGATG GCGTGCTCTA TATCCTGACT GACATTCCCT ATAACCCCGA GAGCAACATA
GTCGATAAGG TCGAGCTGGA ATGCACCGAG CTTGGCCGCC AGTTTGCCGA TTCCATCGTG
AAATACGGTA ACAAGCAAAA ACTGAAAATC AAGCGGGTAG ACGAGCTGCC AGCTCAGGGC
AATGCGGTCA AAATCACCAT CGACAATGTG TACAGCGAAG GCAACGCCAA CCCCTTTAAC
CCCCATCGCA AGCACGTTGC GGCTACCGCA GTGTTGGTGA TTGATGGCGA AGAAACCAAG
ATCAGTGACT TCTCCCGTTT TTCCACCGGC GGTATGTGGG GCGGCTTCAA GGGCTCCTGC
AGCGTGCTCC AGCACACGGT AAACACCCTG GGCAACGATG TTGCCAAGTG GCTGAAGAAA
TACGCGGGCT AA
 
Protein sequence
MHKLPFSAAV TAPLLALMLT ACGATDKPAA DKTPTNAGQT AETPAPETAA APAAPTAPAA 
PEVKVAPAPK AAPVAKAEKI AGDGVLYILT DIPYNPESNI VDKVELECTE LGRQFADSIV
KYGNKQKLKI KRVDELPAQG NAVKITIDNV YSEGNANPFN PHRKHVAATA VLVIDGEETK
ISDFSRFSTG GMWGGFKGSC SVLQHTVNTL GNDVAKWLKK YAG