Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2848 |
Symbol | |
ID | 4605095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3387689 |
End bp | 3388429 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782259 |
Product | SpoOM-related protein |
Protein accession | YP_928720 |
Protein GI | 119775980 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.942777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAA AAATACTGGC TGCCGTAGGC ATTGGCAGTG CCAAGGTGGA TACCCGTTTA CACCAAAGCC AGCTGCTGCC GGGACAAACC TTCAGCGCCA CCATAGTGGT GCAGGGGGGT GACGTGGCGC AAAAAATCGA TGGCATCGAT TTGGCGCTGA TGACCAGGGC CAAGGTCAGC ACTGACAATG GCGACTACTT TAAAAATCAT TGCCTCGCCC GTTGGCGGGT GGCCGAGCGC TTTGAAATCC AGCCCGGCGA AGTGCGTGAA ATCCCCTTCA GCGGTCAATT GCATCCCGAA ACCCCCTTTA CCGCGCTGCC GGTACGAAAC AATCAGTGCC ATGTGTGGCT GCAAACCGGC GCCGATATTG ATTCGGCAAT TGACCCGACC GATGCCGATG TCATCGACAT ACTGCCAACG CCGCTGCTTG GCCATGTGCT GAATGCCATG CAGGAGCTGG GTTTTGTCCT CACCAAGGCC GATGTGGAGC AGGGCTATTT GAGCGCCCCG GGATTTCGCT CCCGCTCAGG CTGTTATCAG GAGCTTGAAT TCCACCCCCG CAGCTTTGGC TTCTCCAGCC TGAGGGAAGT GGAAATCTCT TTGGTGTGCG AAGCTGGCGA GACCCACCTT TTGATTGAGC TTGACCGCGC CTTTCGCGGT GACGGCTACC GCGCGTTTTC CATTGCCAAC AACGCCAGCG CTGGCGAGGT CTTCACCCAG CTTAAGCACT ACATCCGCTG A
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Protein sequence | MFKKILAAVG IGSAKVDTRL HQSQLLPGQT FSATIVVQGG DVAQKIDGID LALMTRAKVS TDNGDYFKNH CLARWRVAER FEIQPGEVRE IPFSGQLHPE TPFTALPVRN NQCHVWLQTG ADIDSAIDPT DADVIDILPT PLLGHVLNAM QELGFVLTKA DVEQGYLSAP GFRSRSGCYQ ELEFHPRSFG FSSLREVEIS LVCEAGETHL LIELDRAFRG DGYRAFSIAN NASAGEVFTQ LKHYIR
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