| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2828 |
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| Symbol | rpmA |
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| ID | 4605075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3366537 |
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| End bp | 3366791 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639782239 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_928700 |
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| Protein GI | 119775960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000113295 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.198807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACACA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGCAAACGT
CTTGGTGTAA AGCGCTTCGG CGGCGAATCA GTTCTGGCTG GTAACATCAT TGTTCGTCAG
CGTGGCACCA AGTTCCACGC CGGTGTGAAC GTAGGTATTG GTCGTGACCA CACCCTGTTC
GCCCTGACTG ACGGCAAAGT TAAGTTCGAA GTTAAAGGTC CTAACAACCG TAAGTTTGTT
AGCATCGAAG ACTAA
|
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| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF
ALTDGKVKFE VKGPNNRKFV SIED
|
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