Gene Sama_2786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2786 
Symbol 
ID4605033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3328347 
End bp3328973 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content58% 
IMG OID639782197 
Productputative transcriptional regulator 
Protein accessionYP_928658 
Protein GI119775918 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.788805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT GCCAAAAAAT CCTCGATTTG CTGAAACAGC AGGGGCCTAT GACCGCCGCT 
GGTCTGGCCG AATCGCTGGG GCTGACCTCC ATGGGAGTCA GGCAGCATCT GCAGGCCATG
GAAGCCGAAG GCAATCTCGC CTATGAAGAT ATCAGCGAGG GCCGCGGCCG CCCGGCACGT
TACTGGACCC TGACCGACGC TGCGCAAAAA CACTTTGGCG ATCGCCACAG CGAACTGACA
TTAAGGCTGA TTGATTCGGT TAAGGTGATT TTTGGCGATG TGGGTATGGA TGCCCTGATA
AGTCACCGGG AAGCGGCCTC AGAGCAGGCG TATCTTGAGC GTATGGCGGG CGAGACCACC
CTTGCCGGGC GCATAGCACA GCTTGCGGCC ATTCGCAGCG AAGAAGGCTA TATGGCGACC
GTGGCAAACG AAGGCGATGT CTGGTGGCTG TACGAGAATC ACTGCCCCAT TTGCGCGGCA
GCAACCAGCT GCCAGAGCTT TTGCCGCTCG GAGCTTATGT TGTTTCGCCG CTTGCTGGGG
GAAGGCATTA CTGTGGAGCG CAGCGAACAC ATTATTGAAG GGGCGCGCCG CTGCGCCTAT
CGCATCACTG CGGCCATGGC CGATTAA
 
Protein sequence
MKTCQKILDL LKQQGPMTAA GLAESLGLTS MGVRQHLQAM EAEGNLAYED ISEGRGRPAR 
YWTLTDAAQK HFGDRHSELT LRLIDSVKVI FGDVGMDALI SHREAASEQA YLERMAGETT
LAGRIAQLAA IRSEEGYMAT VANEGDVWWL YENHCPICAA ATSCQSFCRS ELMLFRRLLG
EGITVERSEH IIEGARRCAY RITAAMAD