Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2786 |
Symbol | |
ID | 4605033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3328347 |
End bp | 3328973 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782197 |
Product | putative transcriptional regulator |
Protein accession | YP_928658 |
Protein GI | 119775918 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.788805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT GCCAAAAAAT CCTCGATTTG CTGAAACAGC AGGGGCCTAT GACCGCCGCT GGTCTGGCCG AATCGCTGGG GCTGACCTCC ATGGGAGTCA GGCAGCATCT GCAGGCCATG GAAGCCGAAG GCAATCTCGC CTATGAAGAT ATCAGCGAGG GCCGCGGCCG CCCGGCACGT TACTGGACCC TGACCGACGC TGCGCAAAAA CACTTTGGCG ATCGCCACAG CGAACTGACA TTAAGGCTGA TTGATTCGGT TAAGGTGATT TTTGGCGATG TGGGTATGGA TGCCCTGATA AGTCACCGGG AAGCGGCCTC AGAGCAGGCG TATCTTGAGC GTATGGCGGG CGAGACCACC CTTGCCGGGC GCATAGCACA GCTTGCGGCC ATTCGCAGCG AAGAAGGCTA TATGGCGACC GTGGCAAACG AAGGCGATGT CTGGTGGCTG TACGAGAATC ACTGCCCCAT TTGCGCGGCA GCAACCAGCT GCCAGAGCTT TTGCCGCTCG GAGCTTATGT TGTTTCGCCG CTTGCTGGGG GAAGGCATTA CTGTGGAGCG CAGCGAACAC ATTATTGAAG GGGCGCGCCG CTGCGCCTAT CGCATCACTG CGGCCATGGC CGATTAA
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Protein sequence | MKTCQKILDL LKQQGPMTAA GLAESLGLTS MGVRQHLQAM EAEGNLAYED ISEGRGRPAR YWTLTDAAQK HFGDRHSELT LRLIDSVKVI FGDVGMDALI SHREAASEQA YLERMAGETT LAGRIAQLAA IRSEEGYMAT VANEGDVWWL YENHCPICAA ATSCQSFCRS ELMLFRRLLG EGITVERSEH IIEGARRCAY RITAAMAD
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