| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2777 |
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| Symbol | |
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| ID | 4605024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3319713 |
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| End bp | 3320942 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782188 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_928649 |
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| Protein GI | 119775909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTT CCAGCCTTCG TAACCAGTTC CCTGCACTTG ACCAACACAT TGGCGACTAT
CCGCTGGTGT ATCTGGACAC AGCCGCCACC AGTCAAAAGC CCCGGCAGGT TCTGGATGCC
ATGGCGCACT TTCTGACCAC AGACAACGCC AACGTGCACC GCGCCGCCCA TACCCTGTCG
GGCCGCGCCA CCGCAAGTTA CGAAGCCGTG CGGGATAAAC TCAAAGCCTT TGTCCATGCC
GGCCGCCGGG AAGAAATTAT CTTCACCCAC GGCACCACAG AGGCCATCAA TCTGGTGGCC
AATGGGCTTA AACACCGCCT TAATTCCGGC GATGTCATCC TGGTAGACAG CGCCGCCCAC
CATGCCAATC TGGTGCCCTG GCAGCAGCTT GCCGCGCAAA CCGGTGCCAG GGTGGAAGCC
ATTCCCCTGA CGGCAGAACT GCGTTTGGAT ACCGCCGCCT TCGAAGCACA GCTCGAAGCA
GGCGCCGCCC TGGTGGCGCT CGGTCATGTA TCCAACGTGC TGGGCACAGT GAATGACGTC
AACACACTCT GCGCCATGGC CCGCGCCAAA GGTGCCCTCA CGCTGGTGGA CGGTGCTCAG
GCCGTGGCCC ACCAGCGGGT GGATGTGACC GATATCGGCT GCGACTTTTA TGTGTTCTCC
GGCCACAAGA TGTATGGGCC CGATGGCGTG GGTGTGCTCT ATGGCCGCTA TGAGGTGCTC
GATACCCTTA CGCCGCTTCT CACAGGTGGC GAGATGATAA AGACGGTAAG CTTTACCGGC
ACCGAATTTG GCGAGCTGCC AAACCGGCTT GAGGCCGGCA CGCCGCCTAT CGTCTCTGTC
ATCGGGCTTG GGGCCGCCAT CGACTTTATC AATAGCCTCG ACAGGCAAGC AGTACTGGCC
CACGAGCATG ACCTTATGGC CCGGCTGCGT GCCGGGCTTG AGGCGGTGTT GCAAATCCGC
ATTCACAGCC CGCGCGATGC TGCGGGGGCT GCCCCCAACA GCGGCGCCAT CGCCTTCAAC
CTGGGGGATG AACATCATCA GGATGTAGGT ATCTTGTTGG ATCAACAGGG AATTGCAGTT
CGCTGCGGCC ATCATTGCGC CATGCCGCTG ATGAGTCTGA TGGGCGTAAA AGGCTGCTGC
CGTGCTTCCA TCGGCCTTTA CACCAGCCCG GATGATATCG ACCGTTTTCT CGCCGCCGTC
AAAGAAGCGG CCGAACTCTT ATGCCCATGA
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| Protein sequence | MNISSLRNQF PALDQHIGDY PLVYLDTAAT SQKPRQVLDA MAHFLTTDNA NVHRAAHTLS
GRATASYEAV RDKLKAFVHA GRREEIIFTH GTTEAINLVA NGLKHRLNSG DVILVDSAAH
HANLVPWQQL AAQTGARVEA IPLTAELRLD TAAFEAQLEA GAALVALGHV SNVLGTVNDV
NTLCAMARAK GALTLVDGAQ AVAHQRVDVT DIGCDFYVFS GHKMYGPDGV GVLYGRYEVL
DTLTPLLTGG EMIKTVSFTG TEFGELPNRL EAGTPPIVSV IGLGAAIDFI NSLDRQAVLA
HEHDLMARLR AGLEAVLQIR IHSPRDAAGA APNSGAIAFN LGDEHHQDVG ILLDQQGIAV
RCGHHCAMPL MSLMGVKGCC RASIGLYTSP DDIDRFLAAV KEAAELLCP
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