Gene Sama_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2776 
Symbol 
ID4605023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3318543 
End bp3319580 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content57% 
IMG OID639782187 
Productaldo/keto reductase family oxidoreductase 
Protein accessionYP_928648 
Protein GI119775908 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACC GCCGCCTGCC CCACTCCAAT CTGGAGGTCA GTTCCCTGTG CCTTGGCACC 
ATGACCTGGG GCGAACAAAA TACCCAGGCC GACGCCTTTG CACAGCTGGA CTACGCCATT
GGCCGGGGTA TCAACTTTAT CGACGCCGCC GAAATGTATC CTGTGCCGCC CCGCCCCGAG
ACCCAGGGGG CGACAGAAGA GATCCTCGGC AACTACCTTA AGGCCCGTGG CAATCGCGAT
GAACTGGTGA TCGCCACCAA GATTTGTGCC CACGGAGGCA AGGGCGACTA TATCCGCCCC
AAGATGGCAC TGGACTGGAA CAACATCCAC GAAGCCGTGG ATCAATCTCT AACCCGTCTG
GGCATAGACA CCATCGACCT GTATCAGCTG CACTGGCCCG ACAGAAACAC CAATTTCTTC
GGCGAGCTGA TGTACAAGCG TGACGATGCC GAGCACCAAA CCCCCATTAT CGAAACCCTC
GAGGCCCTGG CCGAGCTCAT TCGGGTGGGG AAAATCCGTT ATATCGGTGT CTCCAACGAA
ACCCCCTGGG GCATCATGAA GTACCTGCAT CTGGCCGAAA AACATGGTCT GCCCCGCATC
GTTTCGATTC AAAACCCCTA CAACCTGCTT AACCGCAGTT TTGAAGTGGG CATGAGCGAA
ATCAGTCACA GGGAAGAGTT GCCGCTGCTG GCCTACTCGC CACTGGCCTT TGGCACCTTA
AGCGGAAAAT ACCTCAACGG CGAATGGCCG GAGCAGGCAC GCCTGACCCT GTTCAAGCGT
TTTGCCCGCT ACAGCAGCGA CCATGCCAAA GCAGCCACCG AGGCCTATGT GAATCTGGCG
CGGGAGTTCA ATTTAAGTCC GGCGCAAATG GCGCTGGCCT TTGTAAACAG CCGCAGCTTT
GTGGGCAGCA ATATCATAGG CGCCACCTCG GTGGAGCAGC TGAAAGAGAA CATCGACAGC
CTCGATGTCA GCCTGCCCGA GGCGCTTTTT GAGCGCATCA ATGCCCTCGG GGAAATCTAC
CGTTTACCCT GCCCTTAA
 
Protein sequence
MEYRRLPHSN LEVSSLCLGT MTWGEQNTQA DAFAQLDYAI GRGINFIDAA EMYPVPPRPE 
TQGATEEILG NYLKARGNRD ELVIATKICA HGGKGDYIRP KMALDWNNIH EAVDQSLTRL
GIDTIDLYQL HWPDRNTNFF GELMYKRDDA EHQTPIIETL EALAELIRVG KIRYIGVSNE
TPWGIMKYLH LAEKHGLPRI VSIQNPYNLL NRSFEVGMSE ISHREELPLL AYSPLAFGTL
SGKYLNGEWP EQARLTLFKR FARYSSDHAK AATEAYVNLA REFNLSPAQM ALAFVNSRSF
VGSNIIGATS VEQLKENIDS LDVSLPEALF ERINALGEIY RLPCP