| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2731 |
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| Symbol | |
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| ID | 4604978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3265052 |
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| End bp | 3265831 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639782142 |
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| Product | putative diguanylate phosphodiesterase |
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| Protein accession | YP_928603 |
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| Protein GI | 119775863 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTTTC CTGAAGAAAT CAAACAGCAA ACCTGTGCCG ACTGCCTGAG CGGTGTCTCA
CTTGGCTTTC GTATCCGCAT GGCATTTCAG CCCATCATCG ATTGGCAAAC CCGCAACATC
TTCGCCTACG AGGCATTGGT GAGAGGGCCC GAAGGACAAG GCGCTGGCTG GGTGTTTGAG
CACATCAACG ACACCAACAA GTACTATTTT GATCAGACAT GCAGAATCAC CGCCATCAAA
ACCGCTGCGG AGCTTGGATG CGACACCTTT TTATCCATCA ACTTTTTGCC TAACGCCGTC
TACAACCCGC AAACCTGCAT CAAGGCAACC ATAGAGGCAG CCCACCTTTA CAACTTCGAT
TTGAAAAAAC TCATCTTTGA AGTGACTGAA GGGGAAAATA TTATCGACAA GGCGCACTTG
CGGAACATTT TCCAAAGCTA TGCCAAATTC GGCTTTTTAA CTGCTATCGA TGACTATGGT
GCGGGCTATA CCCACATTAG TTGGCTGTCA GAGCTGAAAC CCCATGTGCT CAAATTGGAC
ATGTCGCTCA TCCGTGACAT AGACAAAGAC CCACTCAAAC AGGCACAAAT CAGGGAAATC
AAAGCCCAGT GTGACCTGCA ATGCACTCAA CTTCTCGCTG AAGGCATTGA AACCCATGAA
GAACTCAGCT GTCTGACCGC GATGGGTATT CGCTATTTAC AAGGGTATCT GTTCGCCCCG
CCCACGCTTG AACACCTCAC CAAGGAAAGC GACATAGAAC TACTTCAGGC AATTGATTGA
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| Protein sequence | MDFPEEIKQQ TCADCLSGVS LGFRIRMAFQ PIIDWQTRNI FAYEALVRGP EGQGAGWVFE
HINDTNKYYF DQTCRITAIK TAAELGCDTF LSINFLPNAV YNPQTCIKAT IEAAHLYNFD
LKKLIFEVTE GENIIDKAHL RNIFQSYAKF GFLTAIDDYG AGYTHISWLS ELKPHVLKLD
MSLIRDIDKD PLKQAQIREI KAQCDLQCTQ LLAEGIETHE ELSCLTAMGI RYLQGYLFAP
PTLEHLTKES DIELLQAID
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