| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2724 |
|---|
| Symbol | |
|---|
| ID | 4604971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3259476 |
|---|
| End bp | 3260051 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639782135 |
|---|
| Product | YgfB and YecA |
|---|
| Protein accession | YP_928596 |
|---|
| Protein GI | 119775856 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02292] yecA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC CACCCTCCCT CAAAATTGAA AAACTGCTCG GCGCGCTGGA AGCGGCTGAA
ATTGGTCAGC ATCCGGTGGA AGTGCACGGC GCCATGGTCG GCTTGATTGC CGGTGGTGTA
GAGCAGGGCC GGGGAGCCTG GCTTAAGCCC CTGCTTGAGT TGATGAATGA TGGGCAATCA
ATCCCCGCTG AGCTGCAAGC CCTGGTGGAG GAGCTATTTG TCGATACCCA GGCACGCCTT
GGGGAAATTG ATTTTGGTTT TATGCCGCTA TTGCCCGAAG AAGAAGAGCC CCTGTGTGAC
AGAGTCGAAG CCCTGTCTCT GTGGGTGCAG AGTTTTCTGG CAGGACTTGC CATTATCCAG
CCGGGGCTCA ATCAGGCCTC TGAAGATGTG CGCGAAGTGA TTGCCGATCT CGCCGCCGTG
GCTCAGGTCG AAATCGATGT GGTGGATGAT GAAGAATCAG AAACTGCCTA TGTCGAAATT
CTTGAATTCG TGCGTATGGC GGCCATTCAT TGTTATCAGG AATTTGGCCC CCAGGATGGC
GGCGGCGCTA TACAGCCCAG CAATAATCTG CATTGA
|
|---|
| Protein sequence | MATPPSLKIE KLLGALEAAE IGQHPVEVHG AMVGLIAGGV EQGRGAWLKP LLELMNDGQS
IPAELQALVE ELFVDTQARL GEIDFGFMPL LPEEEEPLCD RVEALSLWVQ SFLAGLAIIQ
PGLNQASEDV REVIADLAAV AQVEIDVVDD EESETAYVEI LEFVRMAAIH CYQEFGPQDG
GGAIQPSNNL H
|
|---|
| |