Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2701 |
Symbol | |
ID | 4604948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3232313 |
End bp | 3232876 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639782112 |
Product | peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_928573 |
Protein GI | 119775833 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCG CCCACCAGCA CCATTCATTT CGGCTGTTAC TGCCCTTAAT GACACTTTGT CTCGCCCTGA TTGGCACAGG GGTGAAGGCA GAAAATCTTG TCACCATAGA AACCAGTCTG GGTGACATGA CCTTTGAGTT TTTCCCCAAT GAAGCGCCAA GGACAGTCGC CAACTTTCAA CGACTCGCTC AAAGCGGTTG GTACGAAGGC AAGTCCTTTT ATCGGGTCGT CAAGGGGCAT GTTATTCAGG CAGGCAGCCT GGATGAAAAC ACAGAGCCCA GGGTGGAAGC CGAGTTCAAC CAGCATCCCC ACATCAAAGG CACCCTGGGG CTTGCCCGGG ACGAAGACCC CAACTCAGGC TCCACGGAAT TTTACATCTG CCATGAAGCG AGGCCACACC TGGATGGCCG CTATACCGTG TTTGGCCAAC TGGTTGAGGG CGAAGCCGTA CTCGATGCCA TCGCCAATCA GGAAGTGATT GAAAAATATT ATGATGAAGA CAAAAAAATC GCCTTCCACG AGCCCAAAAC GCCTGTGTTA ATCAAGGCCA TACGTCTGCA TTAA
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Protein sequence | MQLAHQHHSF RLLLPLMTLC LALIGTGVKA ENLVTIETSL GDMTFEFFPN EAPRTVANFQ RLAQSGWYEG KSFYRVVKGH VIQAGSLDEN TEPRVEAEFN QHPHIKGTLG LARDEDPNSG STEFYICHEA RPHLDGRYTV FGQLVEGEAV LDAIANQEVI EKYYDEDKKI AFHEPKTPVL IKAIRLH
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