| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2696 |
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| Symbol | |
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| ID | 4604943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3223473 |
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| End bp | 3228692 |
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| Gene Length | 5220 bp |
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| Protein Length | 1739 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782107 |
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| Product | serine protease |
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| Protein accession | YP_928568 |
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| Protein GI | 119775828 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTAA AATCCATCAC TCTGGCCACC ATGGCGGCAC TGTACGCCTC AGGTATGGCA
GCAGCATCGA CAGATATCAC CCCTGTTGCC GGTATCAATG CGCTGAAGCA GGTTCAACTG
CCTTCCGTCG AAGAACAGCA ACGTACCCAG GTAAACAAAG TTGAAGCCTA CAGCTCCCGT
GTTAAGACCA ACAGTGGCAA GAACGTACAA CTGCAGCGTG CCACTGCCGC CGACAAGTTC
AAGCCTGAAG AAGGCGTCAG CGGGGAGCAG GTTTACATCA TTGAGCTCTA TGGCAACACG
GTGCAAGACT CTTTTGCGGG CAGTCGCGCG CTCACCCAGA GCAGCCAGCC CTTTGGCCTT
GCTTCAGTAA CAGGCCTGAA GGGCGAAGCC CTGAAATCAC CGGAAGCCGC CTCGATTGAG
CGCGCTATCC TAGAAAAGCA GGACTCCATC TTGTCCGAGG CTTCATCGGT TGTTGGTCGC
TCACTGGAAA CCCCATTGCG CTTTACCAAG GCAATCAACG GTTTCACCAC CAAGATGACC
CAGGACGAGG CAATGCGCCT TGCCAGTATG GGCGCAGTGA AGAGCATTAG CCGTCGCCAA
ATTCTTGAAC TTCAGACCGA CGTTGGCCCT GGCATAATAG GCGCTGACAA GGTGTGGACC
GGTAACACTG CCAGCATGAT GCCCTACATG GGCGAGGGTG TGGTTGTTGG CGTCATCGAC
ACAGGCATCA ATACAGATCA CCCCAGTTTT GCCCCCACCG GTGACGACGG CTATACCGTC
GAAAACCCGC TGGGTAGCGG CAATTATCTG GGTGATTGTG CCAAGGCCGA ATTCGCCGAT
CGCTGTAACG ACAAGCTGAT TGGTGTGTTC AGTTACGAAG AAATTACCGA CCAATATTCC
GCCGACGAAT TCCAGGACCC CAACAAGCCT TGGTATGACC CTGCAGTGGA AATCCGCCCA
CGCTTTGGTG AGGACTACAA TGGTCACGGT TCACACACAG CCTCTACCGC CGCAGGTAAC
GTGAAAAAGA ACGTGCCTTT CGTGGTGCCA GAAGGCGCTA TGGGTGACGG TGTCCCTACA
GGCTATGAGT TTCCGCAAGT GTCCGGTGTC GCGCCCCATG CCAACGTGGT GGCCTTCCAG
GTGTGTTATT CAGCCGACTT TGTGCCCTAT GCCGGTTGTG CCAGTGATGC CATTGTGGCC
GCCATTGAAG ATGCCATCGA TGCCGGTGTT GATGTTATCA ACTTCTCTAT TGGCAGCCCC
ATGGGCAGCG AACCCTGGTC AGCCCCAACT CAGAAAGCTT TCCTGAATGC CCACGAGGCT
GGCATCATGG TTGCTGCCGC GGCCGGTAAT ACAGGCACCA ACGGCTCCAT GGAAATTTTC
GGTTATATCG ACAACACCTC GCCCTGGATT TTGACTGTTG CCGCCTCCAC TACGGGTCGT
ACCCTGAATG TGGAAGGCAA GACCATGACC GGCTTCAGCG GTGGCGATAC CACTCCCCCT
GCGACCCTGA TGGGCGGCAG TATCAGCGGT GAAGTGACAG GTCATCTGGT CTTGGCGGAA
GACTTTGGTG ACAAGCTCTG CGCCCAGCCA TTCCCCGAAG GCACCTTTGC GGCCGATGAT
ATCGTCATCT GTGAGCGCGG AGAGGTTCCA CGCGTTGCCA AGGCCGACAA CGTCAAGGCC
GGTGGTGCCG GTGGTTTTGT GCTCTACAAC ACCAACTTCA GCAGCAGCAA CCCGGAAGGC
AAGATCTTCG ACGACATCTA TTCCCTTCCC GGTATCCATC TCAGTGCCCG CGACTGGACC
TACAAACTCA AGCCCTGGCT GCTCAGCGGT ACTGACCACA TGGCCACCAT TACGGCGTCC
GAAATGGTGC GCAATGTGGA TCCGACCCAG CAGGATATTT TGGCTGAGTT TTCCTCTCGT
GGCCCTGCGC CATACAACCC AGAGCATCTG GTGCCCTCAG TCACCGCGCC CGGCGTGAAT
ATTTTCGCAG CCAACGCGGA TGACCAGCCT TTCACCAGTG CCCCGGCGGC CAGTGACTGG
ACCATCATGA GCGGTACCTC CATGGCGAGC CCGCACACCG CCGGTGCCAT GGCACTGGTA
CGCGATGCCC ACCCGGACTG GACCCCGCAG CAAGTACAAT CTGCGCTGCA GATGACGGCA
GAGCAGGTGG TAACCTACAA GCCTTACAGC TGGGCACAAA ACTTCCTCGA TGCCGGCATT
TACCGAGCAG GCTCAGGTCG CATCAACGTA GCCAATGCCA TCAACGCGGG TCTTCTCATG
AATGAGACTG CAGCCAACTT CCGCGCTGCC GACCCAAGCA ACGGCGGCAT GCCAACCCGC
CTGAACCTGC CTGAGCTGGT GAACCTTAAC TGTAAGGCGC CTTGCAGCTG GGTTCGAGAA
GTGACCGCCA CCGAAGACGG TACCTGGGCC ATCAGCACCG AGACTGATGA GTACAGCGTG
CGCCTGAAAG CCATGCCGGA AACCTTCACC CTCAAGGCCG GTGAAACCCA ATCCGTGGTC
ATCACAGCGG ACATAGTGGA TTCCCAGTCC CATAACGGCA GCGCCGAGCA GGAAGTGCAT
GCCCGGGTAT TCCTGAGTTC CAACAACCCC GAAGTGCCGC AGATTTACTG GCCGGTGGTG
TTCAAGTATG ACGAGGGCAG CCTGCCAAGT GCCATCAATC TGGAAATGAA CCGAGGCAGC
GGCAAGCATG TGCTGAGCAA TATCATGCTG CCCCAGCTGA ACGATGCCAC TTTCACGGCC
GCGACGCCGG TTAAGGGCGA CAAGCAACTG GTCACCCTGC AGCAGAACGA AAATAACGTG
GGTGGCTTCG GTAACCGCCG AGTGGTCAAT GACGACGACT TCCTGTACAT GGTGGATGTG
CCCGCCAACA GCGCCCGCAT AGTGGTGGAG GTCCTGGGTC TGAAGGACTC CACAGCCCCC
ATCGACCTCT ACCCAATGTG GGGTGGTGAT GCCGACATTT ATGTGGGTAT TGACCTCAAC
AACGACGGGG TCCCTCAATG GGAAGAAGAG GCCATATGTT ATTCGGCTAC CTTCGGCAAC
GATGAATTCT GTAACATAGA TAACCCTGAA GCGGGTAACT ACTGGGTGGT GATAGATAAC
TACCGTGGCC CATCCTACGT TGACCGCCCC ACAGACACCT TTGAGATTGC CACCGCTGTG
GTATCCAAAG ATGCGGCAAG CAATCTCAGC GTCACCGGTC CAAGCGTCAC CGACGGTATC
AACCCCAGTG AACTGACCCT GAACTGGGAG TTGCCAGAGT CCGTGGAAGG GGATGTGTAC
TACAGCGCCC TGATGGTCGG CACTGATGCC AACAACATTG CCAACGTGGA TACAGTAGCA
ACCCGCCTGT ACCGTGGCGC CAACGAGTTC ACCATCAAGG GATCACAAAC CCAGGCGCTT
GCCGATCAGC GGGTAAGCGT GACTCTGCAC CTCAAGGAAA ACCTCGATGG TTATGACCGC
GACTTTAGCC TGGATGTGCA AATTCCTGAC AACCTGTACC TGGTTGAGGA CAGCCTCAAG
GTGTCCCGCG CAGCAGCCGG TGAGCTGGCC ATTACCGACT CTGGCTTCAG CCTGGTAGGT
ACACAGGAAT CCACCCTGCA CGCCGCGCCC GAGTACAAGA TCACCACCAG CAAGGACGAT
GCCATGTGCC GTCTGCCGAA CCTGGGTCAG GGTGAAGACA GCAAGTACCT GGATCTGCGT
CAATTCGGCT TCCCAACCCA ATTGGGTGGC GGCTATCAGG ATGTGTTCGA GTTCGACCTG
CGTTCCGTTT GGGGTAAAGA TGGCCGCATT TCGCTGTTCA ATAACTTCCA GTATGAGAAG
ACACCGATAG TGCGCATCAA TCCGATAGGT TATCTGCAGT TGGATGAGTT GCCGGACTTC
TTTGGTGATA ACCAGGATCT CAATCAGCCC AGTTTCCCTT ACCTGCCGAT TGCCCCCCTC
TGGCGCGGTG TGCACTACAC TGACAACGGC CTGGATTGGG GACGTCAGTA CGCCCCGCTG
CAGCCAAACG CGTATAGCGA CAAGGACAAC AAGGGTATTT CCCTGGCCTA TACCGCGGCC
GGGATGATGA TAGTCGAGTG GGACAACGCC TATATGGCCG ATGCGTCATG GGACTACGTC
AACAAAAAGA TTGTCTATAC CTCCCGCGGC GACTCGGTGG ACTTTGAAGT GCTGCTCAAC
AGCAACTACG GTTTTGGTGA TGGCGAATAT GAGATGTACT TTGCCTACGA CAACCTGAAC
TGGGGTCCAA CCGATGGTTT CAGTACCATA GGTCTGAAAG GCTTTGTGGG TCCACGTGAT
CCTTATGGCC CAACCAATGG TCCTATCGGT GCCCAGTACC TATTCGGTGA TGCACGGGAT
AAGATAGAAG ACGAAATGGT GATCTGTTAT GACTATGCCG GCCCAGAGTC GTCACAGTTT
GACGTCACCT TCGACGTTCT GGTCAAGACC AATGCTGCCG GTCAGCCACA AGATATAGTG
GCAACCCTGA ACGGCACAGA CGTGGAGCAA AGCGAGCTTA GCTACAGCAT CAACGTCCCC
AGCAACCTCA AGATTGGTGC CATCAAGGAT TACACCATCA GCGAGGACTC GAGTCTGGAA
GATGTGATGG TGGCCTACAG CGACAGCAAC ACTGTACCCA ACGTCATCAA GGTAACCGGT
GAGCACATCA CTGCCGTGGT CAATGGCAAC GAACCCGGTG CTACCTTCGA TCTGGTTCCG
GAAGCTGACT TCTTCGGCCA GACCGAAGTA ACAGTCACTG TATCCGACGC CAACAACCCC
GGCGATGCCG TCAGCACCAG CTTTATCCTG ACTGTCACGC CGGAAGCCGA CGCCCCAGTG
GCCAAGGTAA GCGACACCAA CCTTACCATT ACCGAAGGCG ACACACTGAC CCTGGATGCC
AGCGCTTCTA TGGATCCTGA TGGTGACAGC CTGACGTTCA CATGGGAAGG CGACGGCAAT
ATCGCTGACA GCGCCGCAGC CGTTACTCAG GTAACAGGTT TGGCTACTGG CAATCACACC
TTTACAGTCA CTGTGTCTGA TGGCGATGAA ACAGCCAGCG CCGAAGTGGC GGTCAAGGTC
GTTGCCAAAG CCTCACCTGC CGAACCGGCA GCGCCAGCTG ATAAAGATGG TGGTGGCGCA
CTTGGCTGGT TGGCCTTGCT GTTAATGCCA TTGGCGGCAC TGCGTCGTCG TTCTCGCTAA
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| Protein sequence | MKLKSITLAT MAALYASGMA AASTDITPVA GINALKQVQL PSVEEQQRTQ VNKVEAYSSR
VKTNSGKNVQ LQRATAADKF KPEEGVSGEQ VYIIELYGNT VQDSFAGSRA LTQSSQPFGL
ASVTGLKGEA LKSPEAASIE RAILEKQDSI LSEASSVVGR SLETPLRFTK AINGFTTKMT
QDEAMRLASM GAVKSISRRQ ILELQTDVGP GIIGADKVWT GNTASMMPYM GEGVVVGVID
TGINTDHPSF APTGDDGYTV ENPLGSGNYL GDCAKAEFAD RCNDKLIGVF SYEEITDQYS
ADEFQDPNKP WYDPAVEIRP RFGEDYNGHG SHTASTAAGN VKKNVPFVVP EGAMGDGVPT
GYEFPQVSGV APHANVVAFQ VCYSADFVPY AGCASDAIVA AIEDAIDAGV DVINFSIGSP
MGSEPWSAPT QKAFLNAHEA GIMVAAAAGN TGTNGSMEIF GYIDNTSPWI LTVAASTTGR
TLNVEGKTMT GFSGGDTTPP ATLMGGSISG EVTGHLVLAE DFGDKLCAQP FPEGTFAADD
IVICERGEVP RVAKADNVKA GGAGGFVLYN TNFSSSNPEG KIFDDIYSLP GIHLSARDWT
YKLKPWLLSG TDHMATITAS EMVRNVDPTQ QDILAEFSSR GPAPYNPEHL VPSVTAPGVN
IFAANADDQP FTSAPAASDW TIMSGTSMAS PHTAGAMALV RDAHPDWTPQ QVQSALQMTA
EQVVTYKPYS WAQNFLDAGI YRAGSGRINV ANAINAGLLM NETAANFRAA DPSNGGMPTR
LNLPELVNLN CKAPCSWVRE VTATEDGTWA ISTETDEYSV RLKAMPETFT LKAGETQSVV
ITADIVDSQS HNGSAEQEVH ARVFLSSNNP EVPQIYWPVV FKYDEGSLPS AINLEMNRGS
GKHVLSNIML PQLNDATFTA ATPVKGDKQL VTLQQNENNV GGFGNRRVVN DDDFLYMVDV
PANSARIVVE VLGLKDSTAP IDLYPMWGGD ADIYVGIDLN NDGVPQWEEE AICYSATFGN
DEFCNIDNPE AGNYWVVIDN YRGPSYVDRP TDTFEIATAV VSKDAASNLS VTGPSVTDGI
NPSELTLNWE LPESVEGDVY YSALMVGTDA NNIANVDTVA TRLYRGANEF TIKGSQTQAL
ADQRVSVTLH LKENLDGYDR DFSLDVQIPD NLYLVEDSLK VSRAAAGELA ITDSGFSLVG
TQESTLHAAP EYKITTSKDD AMCRLPNLGQ GEDSKYLDLR QFGFPTQLGG GYQDVFEFDL
RSVWGKDGRI SLFNNFQYEK TPIVRINPIG YLQLDELPDF FGDNQDLNQP SFPYLPIAPL
WRGVHYTDNG LDWGRQYAPL QPNAYSDKDN KGISLAYTAA GMMIVEWDNA YMADASWDYV
NKKIVYTSRG DSVDFEVLLN SNYGFGDGEY EMYFAYDNLN WGPTDGFSTI GLKGFVGPRD
PYGPTNGPIG AQYLFGDARD KIEDEMVICY DYAGPESSQF DVTFDVLVKT NAAGQPQDIV
ATLNGTDVEQ SELSYSINVP SNLKIGAIKD YTISEDSSLE DVMVAYSDSN TVPNVIKVTG
EHITAVVNGN EPGATFDLVP EADFFGQTEV TVTVSDANNP GDAVSTSFIL TVTPEADAPV
AKVSDTNLTI TEGDTLTLDA SASMDPDGDS LTFTWEGDGN IADSAAAVTQ VTGLATGNHT
FTVTVSDGDE TASAEVAVKV VAKASPAEPA APADKDGGGA LGWLALLLMP LAALRRRSR
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