Gene Sama_2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2695 
Symbol 
ID4604942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3222217 
End bp3222984 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID639782106 
Productperiplasmic peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_928567 
Protein GI119775827 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACT ATACACATCA AAAGTTCGTC CTTCCGCTAC TGACTGCGAC GTTACTCATG 
GGTTGCGAAC CCACAGTTCA ATCCCCTCCC CCCGCACAAA ATGCCATCAC AGCCAATGCC
GAAACAGCGC AATCGGCAAC GGTCGAAAAG TCCTATGCTG TGGGATCCCA ATTCGGCAAC
TTTGCCCGGG AGTACCTTAA AGCACAGGCT GAGATCAATG AGCCGCTCGA TGAAGCCATT
ATCATCGCGG CCTTTGGCGA TGCACTGCGT GATAAGGCCA GCATGGATCA CGAGGTTGCA
GGGAAGCTAG TCAGTGAAAT GCGTCTGGCG ACCCAAAAAC GACGCGCCGA GCAATTCAAG
GCACAGCAGC TGGCAAGTAA CAGTTCTTTT TTGGTGGAAA ACGGCAAAAA ACCTGGGGTG
ACCACCACAG AATCAGGATT GCAATACGAG GTACTGACCC TGGGAACAGG CCCAAAGCCG
GGCCCAAAAG ATATAGTAAG CGTGCATTAC GAGGGACAGC TTATCGATGG CAAGGTGTTC
GACAGTTCTT TTAAACGCAA CGCTCCAGCC ACTTTTTCAC TCGACCAGGT CATCAAAGGC
TGGACCGAAG GGCTGCAGTT AATGCCTGTG GGCAGCAAGT TCCGCCTTAC CCTGCCCCAT
GATTTGGGAT ATGGCAGTCG TGGTGCTTTG GGCGGAGAAA TCCCACCCTT TGCTACCCTG
GAATTCGTCA TTGAGCTGTT GGATATCCAA ACCCCTACGG ACAAATAA
 
Protein sequence
MSHYTHQKFV LPLLTATLLM GCEPTVQSPP PAQNAITANA ETAQSATVEK SYAVGSQFGN 
FAREYLKAQA EINEPLDEAI IIAAFGDALR DKASMDHEVA GKLVSEMRLA TQKRRAEQFK
AQQLASNSSF LVENGKKPGV TTTESGLQYE VLTLGTGPKP GPKDIVSVHY EGQLIDGKVF
DSSFKRNAPA TFSLDQVIKG WTEGLQLMPV GSKFRLTLPH DLGYGSRGAL GGEIPPFATL
EFVIELLDIQ TPTDK