| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2661 |
|---|
| Symbol | |
|---|
| ID | 4604908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3184723 |
|---|
| End bp | 3186177 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639782072 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_928533 |
|---|
| Protein GI | 119775793 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAC TCAACCCCCT CGCTCGCACC CTCTGTCTGT CCTTCAGTAT CGCTCTGGCG
TTGGGGCTTA CCGCTCACGC CCATGCCCAA AGCCTGAAAT TGACCAACTT TCAGTTGGTG
GACGTGGAGC AAGGTCGCTT GGTGCAGGGT AAACAGCTGC TGATTGAAGA CGGCCGAATT
GTGCGTGTTG CGCAGGCGAA TGAGCCGCTT GGCGCTGACC ACACACAAGA TCTGGGCGGC
CAGTATCTGT TGCCATCCTT GTGGGACATG CATGTGCACT TTGAGGGGCG TGAGCTGGTG
GAAGATAACG CACTGCTGCT TCCCCTTTAC CTGGCCTATG GCATTACGGC GGTGCGTGAA
GCCGCAAGCG ACCTTGCGCC GGAAGTGATG GTGTGGCGTC AGCAAATTGC CGATGGTGAA
CGCCTTGGTC CGCGTATCTT CTCGGCGGGA CAAAAATTTG AGGGCATAGA CTCGCTGTGG
AGCGGTGACA TGGAAGTCGG TGATGAGGCT GCCATGGGAC GCGGCATGGA GAAGCTGACT
GCCATGAAGG TGGATTTCAT CAAGATAACC GAAAACACCA TGGCTCCGGC GCTGTATCTT
AAAACCGTGG CCGAAGCTCA CAGACGTGGG TTTCGGGTAT CCAGCCACAT TCCCTATGGG
GTAAGCGTGG CCGATGCCGC CCGTGCGGGG TTGTCGAGTA TTGAGCATGT CTCCTATGTG
CTGCGTTTGG GACACGCAGA TGAGGCGGTC ATCTCAGCGT CCGTGAGAGA TGGCAGTGTG
CCAGCCAAAG AAGCCGCCGC CCGCTACCGG CAAGGTTTCC AGCAGCAAGT GGCTACTGAG
GGATATAAGA TGCTGGCGAC TGAGGGGGTA GCCGTCACGC CCACCCTGAT TGGTGGCTAT
CAGCTGGCGC ATCTTGACAC CAACAATCAC AGTCAGGATG CATTTTTGCG TTATCTCACC
ACGGCCTTTA CCGACAAATA CCGCTGGCGC ATAGAGCGCA TGGGCGAGCA GACCGCCGAG
CAGTGGCAAG CCCGTAAGCA GCGCTATGAG GCGGAGGCAA GTCAGCTGCG TCACCTGGAA
GCCGCCGGGG TCATGTTGCT CGCAGGCAGT GACTCTGCCG CGCTCAATAC CTATGTGTAC
CCTGCCGAAG GGCTGCATAC CGAATTGCAG TTGTGGCAAA AGGCGGGACT GAGCCCGGCG
AGAATTTTGC GCGCAGCCAC CCTCGATGGC GCCAAATTTA TGGGGCTGGA TAAGGACTAC
GGCAGTATCG CCGAGGGTAA GCGGGCGGAT TTGTTGGTGC TAAAAGCCAA TCCGCTGGTG
GATATCAGCG CAACATTGAA AATACACAGC CTGGTGCAGG GCGGGGAATA TCATAACGAA
GCTGAGCTGG CGCGCTGGAA AGACAATGCC GCTGCGGCGG TGCAAATCCT TAATACCGGC
CGCAAGGATA TCTAG
|
|---|
| Protein sequence | MPRLNPLART LCLSFSIALA LGLTAHAHAQ SLKLTNFQLV DVEQGRLVQG KQLLIEDGRI
VRVAQANEPL GADHTQDLGG QYLLPSLWDM HVHFEGRELV EDNALLLPLY LAYGITAVRE
AASDLAPEVM VWRQQIADGE RLGPRIFSAG QKFEGIDSLW SGDMEVGDEA AMGRGMEKLT
AMKVDFIKIT ENTMAPALYL KTVAEAHRRG FRVSSHIPYG VSVADAARAG LSSIEHVSYV
LRLGHADEAV ISASVRDGSV PAKEAAARYR QGFQQQVATE GYKMLATEGV AVTPTLIGGY
QLAHLDTNNH SQDAFLRYLT TAFTDKYRWR IERMGEQTAE QWQARKQRYE AEASQLRHLE
AAGVMLLAGS DSAALNTYVY PAEGLHTELQ LWQKAGLSPA RILRAATLDG AKFMGLDKDY
GSIAEGKRAD LLVLKANPLV DISATLKIHS LVQGGEYHNE AELARWKDNA AAAVQILNTG
RKDI
|
|---|
| |