Gene Sama_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2648 
Symbol 
ID4604895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3172632 
End bp3174128 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content56% 
IMG OID639782059 
Productaldehyde dehydrogenase 
Protein accessionYP_928520 
Protein GI119775780 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.868356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAC CCCAAAGCCG CAGCGAATGG GAAGCAATGG CGCAGCGCCT TGAAATCAAT 
GGTAGAGCCT TCATTAATGG CCACTATTGC GATGCCGTTG GCAAGGAAAC CTTTGACTGC
ATCAGTCCTG TTGATGGCCG TTTACTGACT CAGGTGGCCA GCTGTCAGCA AGCCGATGCC
GATATTGCCG TTGCCAATGC CCGTGCGGTG TTTGAGTCCG GAGTGTGGTC TTTGCAATCC
CCGGTCAAGC GTAAAAAGGT GATGATCCGC TTTGCCGAAT TGCTGGAAGC GCATGCCGAC
GAGCTGGCGT TGCTTGAAAC CCTTGATATG GGTAAGCCCA TCGCCCATTC CAAGGCGGTG
GATGTGGCTG GTGCCGCCCG CGCCATTCGC TGGTCTGGAG AGGCAATCGA CAAAATTTAC
GATGAACTGG CACCCACCCC GCACAACGAA ATCGGCATGA TCACCCGCGA GCCCGTGGGT
GTGGTGGCTG CTATCGTGCC CTGGAACTTC CCCATGCTGA TGGCCTGTTG GAAGCTGGGG
CCAGCCCTTG CCACAGGTAA CAGTGTGGTG CTCAAGCCAT CTGAAAAATC CCCACTTACC
GCCATTCGTA TGGCGCAGCT TGCCAAAGAG GCAGGGCTGC CTGATGGCGT ACTGAACGTG
CTGCCGGGGT TTGGCCATAC CGTGGGCCAG GCATTGGCAC TGCATATGGA TGTGGATACG
CTCGTATTCA CAGGTTCCAC CAAGATTGCC AAGCAGCTGA TGGTGTATGC CGGTCAGTCC
AATATGAAAC GGGTCTGGCT CGAAGCTGGT GGCAAGAGTC CCAATATCGT ATTCAACGAT
GCACCTGATC TGAAAGCCGC CGCCGAAGCT GCCGCCTCAG CCATCGCCTT TAATCAGGGC
GAGGTGTGCA CCGCGGGGTC GCGTCTTTTG GTGGAATCGG GAGTCAAGGA TGAGCTGATT
AAGCTTATCG TTAAGGAAAT GGAAGCCTGG CAGCCCGGTC ATCCGCTGGA CCCTGCCACC
ACCTGCGGCG CTGTGGTAGA CAAACAGCAG CTGGATACCG TGCTTGGCTA TATCAAAGCC
GGTCACGATG AAGGGGCCAA ACTCATGTGT GGTGGCAGCC AGGTGCTTGC CGAAACCGGC
GGTGTATATG TTGCGCCTAC CGTGTTCGAT GGTGTCACCA ATCAGATGAA AATCGCCCGA
GAGGAGATTT TTGGCCCTGT GATGTCAGTG ATCACCTTTG ATGGTATGGA CGAAGCCGTT
GCTATTGCCA ACGATACGAT TTATGGCCTT GCCGCCGGTG TTTGGACCTC GGATATCAGC
AAGGCCCATA AAACGGCCAA GGCACTTCGC AGCGGCATGG TATGGATTAA TCACTACGAT
GGTGGCGATA TGACAGCGCC CTTCGGTGGC TATAAGCAGT CCGGTAATGG CCGTGACAAG
TCACTGCACG CCTTTGAGAA ATACACTGAA GTGAAGGCGA CCTGGATAGC GCTCTGA
 
Protein sequence
MSTPQSRSEW EAMAQRLEIN GRAFINGHYC DAVGKETFDC ISPVDGRLLT QVASCQQADA 
DIAVANARAV FESGVWSLQS PVKRKKVMIR FAELLEAHAD ELALLETLDM GKPIAHSKAV
DVAGAARAIR WSGEAIDKIY DELAPTPHNE IGMITREPVG VVAAIVPWNF PMLMACWKLG
PALATGNSVV LKPSEKSPLT AIRMAQLAKE AGLPDGVLNV LPGFGHTVGQ ALALHMDVDT
LVFTGSTKIA KQLMVYAGQS NMKRVWLEAG GKSPNIVFND APDLKAAAEA AASAIAFNQG
EVCTAGSRLL VESGVKDELI KLIVKEMEAW QPGHPLDPAT TCGAVVDKQQ LDTVLGYIKA
GHDEGAKLMC GGSQVLAETG GVYVAPTVFD GVTNQMKIAR EEIFGPVMSV ITFDGMDEAV
AIANDTIYGL AAGVWTSDIS KAHKTAKALR SGMVWINHYD GGDMTAPFGG YKQSGNGRDK
SLHAFEKYTE VKATWIAL