Gene Sama_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2645 
Symbol 
ID4604892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3169216 
End bp3169980 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID639782056 
Productglutamine amidotransferase 
Protein accessionYP_928517 
Protein GI119775777 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG CCACGATACC CCTTATTGGT GTCTCTGCCT GTAATACCCC GATTGGACTG 
CAGACGTTTA ATACGGTGGG AGAAAAATAT CTTTTAGGTG TGATTAATGG CACTGGCGGT
TGGCCGCTGA TCATTCCTTC TATTGGCGAT GGCATGCCAA CGGAACTCTT GCTTGAGCGT
CTGGACGGCA TACTGTTCAC AGGTTCACCT TCCAATGTCG AACCACATCA CTATTCGGGG
CCGGCCAGCG AGCCGGGAAC TCATCACGAT CCCCGCCGTG ATGCCACCAC CTTGCCTTTG
ATTAAGGCGG CTATCGCTGC GGGCGTGCCG GTACTGGGTA TCTGTCGCGG CTTCCAGGAA
ATGAACGTGG CCTTTGGCGG CAGTTTGCAC CAAAAGTTAC ATGAAACGGG TGTGTTTGAA
GAGCACAGGG AAGACAGAAC TGCGCCACTT GAGGTGCAGT ATGGTCTGGC CCACACGGTG
ACTCTGGAGC CCGGGGGGGT AATTTTCGAA GCCTGGGGCC GCAGCTCGGC GGAAGTGAAT
TCCGTCCATA CTCAGGGCGT TGAACGTCTG GGTAACGGGT TGCGGCCAGA AGCCTATGCA
CCGGATGGCT TGATAGAAGC CTTCTCTGTT ACAGATGCCA AAAATTTTGC CCTGGGTGTG
CAATTTCATC CCGAATGGAA AGTGGCCGAC AATGCTTTTT ATCTGTCGAT TTTCAATGCC
TTCGGTGACG CGTGTCGACG CAGGGCCCAA GAGCGAGCGA GATAA
 
Protein sequence
MSDATIPLIG VSACNTPIGL QTFNTVGEKY LLGVINGTGG WPLIIPSIGD GMPTELLLER 
LDGILFTGSP SNVEPHHYSG PASEPGTHHD PRRDATTLPL IKAAIAAGVP VLGICRGFQE
MNVAFGGSLH QKLHETGVFE EHREDRTAPL EVQYGLAHTV TLEPGGVIFE AWGRSSAEVN
SVHTQGVERL GNGLRPEAYA PDGLIEAFSV TDAKNFALGV QFHPEWKVAD NAFYLSIFNA
FGDACRRRAQ ERAR