| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2641 |
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| Symbol | |
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| ID | 4604888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3163901 |
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| End bp | 3165037 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782052 |
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| Product | polyamine ABC transporter, ATP-binding protein |
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| Protein accession | YP_928513 |
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| Protein GI | 119775773 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.220503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATGA CCTCGGGCGT CACCAATAAA CCAACGACAA AGACGCAAGA CGAAGTACTG
CTCAAAATTG AGCGGGTAAG CAAACTGTTT GATGATGTTC GCGCTGTGGA CGATGTGTCC
CTGACCATCA ACAAAGGGGA AATCTTCGCA TTGCTTGGGG GCTCTGGCTC CGGAAAATCT
ACCCTGCTAC GGATGCTTGC CGGGTTTGAG AGGCCAACGG AAGGTCGTAT TTATCTCGAC
GGTCAGGACA TTACCGATCT GCCGCCCTAC GAGCGTCCGA TCAATATGAT GTTCCAGTCA
TACGCGCTTT TCCCTCATAT GACAGTGGAG CAAAACATTG CCTTTGGTCT GAAGCAGGAC
AAGATGTCAA AGGCTGACAT TTCCCAGCGG GTGCAGGAAA TGCTCAAGTT GGTGCACATG
GAACAGTACG CCAAGCGTAA GCCCCATCAG CTCTCTGGTG GTCAGCGCCA GCGTGTGGCG
TTGGCCCGCT CGCTTGCCAA GCGCCCCAAA CTGCTGCTGC TCGATGAGCC CATGGGCGCA
CTGGATAAAA AACTGCGTAC CCAGATGCAG CTCGAAGTGG TGGAAATTCT TGAACGTGTA
GGGGTGACCT GTGTGATGGT GACCCACGAT CAGGAAGAAG CCATGACCAT GGCTGGTCGC
ATCGCCATTA TGAGCGACGG CTGGATTGCC CAGGTGGGCA GCCCCATGGA CATCTACGAG
AGCCCCAACA GCCGTATGAT TGCCGAGTTC ATCGGTACAG TGAACCTGTT TGATTGTGAA
ATCATCGAAG ATGAGGCCGA CCACGCAATT CTCAAGTCGC CGACCCTGCC ACAGCCATTC
CTGATTGGCC ACGGTGTAAC CACCAGTCTG GAAGACAAGC ACGTGTGGCT GGCGGTGCGT
CCTGAAAAGA CGCTGATTAC CCGCGAGCAG CCCGAAGGCG AGTACAACTG GGCCAGGGGC
AAGGTACATG ACATTGCCTA TCTCGGTGGC CTGTCGGTGT ATTACATCAA GCTGGAAGAC
GACAAAATCA TCCAGTGCTC CATGACCAAC ACCGAACGCC GCGCGGACCA CCCAACCTGG
GGCGATGACA TTTACATCAG CTGGGAGGCC ACCAGTGGCG TGGTATTGAG ATCATGA
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| Protein sequence | MAMTSGVTNK PTTKTQDEVL LKIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE RPTEGRIYLD GQDITDLPPY ERPINMMFQS YALFPHMTVE QNIAFGLKQD
KMSKADISQR VQEMLKLVHM EQYAKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR IAIMSDGWIA QVGSPMDIYE
SPNSRMIAEF IGTVNLFDCE IIEDEADHAI LKSPTLPQPF LIGHGVTTSL EDKHVWLAVR
PEKTLITREQ PEGEYNWARG KVHDIAYLGG LSVYYIKLED DKIIQCSMTN TERRADHPTW
GDDIYISWEA TSGVVLRS
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