Gene Sama_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2595 
Symbol 
ID4604842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3102560 
End bp3103525 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content55% 
IMG OID639781996 
Productlipoyl synthase 
Protein accessionYP_928467 
Protein GI119775727 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0686543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC CCGAAAGATT GCAGCCGGGC GTCAAACTGC GTGACGCAGA CAAAGTCGCC 
CGAATTCCGG TAAAAATCAT GCCATCCGAG CGTGAGACCA TGCTCAGAAA GCCAGATTGG
CTGCGGGTAA AGCTGCCTGC CTCCAATCAG CGCATCACCG AAATCAAGCA GGCACTGCGC
AGCAACGGCC TTCACTCAGT GTGTGAAGAA GCCTCCTGCC CTAACTTGGC AGAATGCTTT
AACCACGGTA CCGCCACCTT TATGATTTTG GGTGCCATTT GTACCCGCCG CTGCCCATTC
TGCGACGTGG CCCACGGCCG TCCACTGAAA CCTGATGCCG ATGAGCCGGT TAAACTGGCA
AAGACCATCC GCGATATGAA GCTCAAGTAC GTGGTGATCA CTTCCGTTGA CCGCGATGAC
CTGCGTGACG GCGGTGCCCA GCATTTTGCC GACTGTATCC GTGAAATCCG CGCCCTGAAT
CCGCACATCC AGATTGAAAC CCTGGTACCC GATTTCCGCG GCCGTATCGA CGTTGCACTG
GATATCCTGA GTACCAATCC ACCGGATGTA TTCAACCACA ACCTGGAAAC TGCACCTGCG
CACTATCGCA AGGCTCGCCC GGGCGCCAAC TATCAATGGT CACTGGATCT GCTCAAGCGC
TTTAAAGAGC GTCACCCAAA CATTCCAACC AAGTCTGGTT TGATGATGGG GCTGGGTGAA
ACCAACGAAG AAATCATTCA GGTGCTCAAA GATCTACGTG CCCACGATGT GAACATGCTG
ACCCTGGGCC AGTACCTGCA GCCGTCCAAG TTCCACCTGC CGGTAGAGCG CTACGTGAGC
CCACAGGAAT TTGATGAGCT GAAAGTGATT GCCGAAGATC TGGGATTCAG CCACGCCGCC
TGTGGCCCGC TGGTGCGCTC AAGCTACCAT GCCGACCTCC AGGCACAGGG CAAGGAAGTG
AAATAA
 
Protein sequence
MNRPERLQPG VKLRDADKVA RIPVKIMPSE RETMLRKPDW LRVKLPASNQ RITEIKQALR 
SNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDADEPVKLA
KTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRALN PHIQIETLVP DFRGRIDVAL
DILSTNPPDV FNHNLETAPA HYRKARPGAN YQWSLDLLKR FKERHPNIPT KSGLMMGLGE
TNEEIIQVLK DLRAHDVNML TLGQYLQPSK FHLPVERYVS PQEFDELKVI AEDLGFSHAA
CGPLVRSSYH ADLQAQGKEV K