Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2595 |
Symbol | |
ID | 4604842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3102560 |
End bp | 3103525 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781996 |
Product | lipoyl synthase |
Protein accession | YP_928467 |
Protein GI | 119775727 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0686543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC CCGAAAGATT GCAGCCGGGC GTCAAACTGC GTGACGCAGA CAAAGTCGCC CGAATTCCGG TAAAAATCAT GCCATCCGAG CGTGAGACCA TGCTCAGAAA GCCAGATTGG CTGCGGGTAA AGCTGCCTGC CTCCAATCAG CGCATCACCG AAATCAAGCA GGCACTGCGC AGCAACGGCC TTCACTCAGT GTGTGAAGAA GCCTCCTGCC CTAACTTGGC AGAATGCTTT AACCACGGTA CCGCCACCTT TATGATTTTG GGTGCCATTT GTACCCGCCG CTGCCCATTC TGCGACGTGG CCCACGGCCG TCCACTGAAA CCTGATGCCG ATGAGCCGGT TAAACTGGCA AAGACCATCC GCGATATGAA GCTCAAGTAC GTGGTGATCA CTTCCGTTGA CCGCGATGAC CTGCGTGACG GCGGTGCCCA GCATTTTGCC GACTGTATCC GTGAAATCCG CGCCCTGAAT CCGCACATCC AGATTGAAAC CCTGGTACCC GATTTCCGCG GCCGTATCGA CGTTGCACTG GATATCCTGA GTACCAATCC ACCGGATGTA TTCAACCACA ACCTGGAAAC TGCACCTGCG CACTATCGCA AGGCTCGCCC GGGCGCCAAC TATCAATGGT CACTGGATCT GCTCAAGCGC TTTAAAGAGC GTCACCCAAA CATTCCAACC AAGTCTGGTT TGATGATGGG GCTGGGTGAA ACCAACGAAG AAATCATTCA GGTGCTCAAA GATCTACGTG CCCACGATGT GAACATGCTG ACCCTGGGCC AGTACCTGCA GCCGTCCAAG TTCCACCTGC CGGTAGAGCG CTACGTGAGC CCACAGGAAT TTGATGAGCT GAAAGTGATT GCCGAAGATC TGGGATTCAG CCACGCCGCC TGTGGCCCGC TGGTGCGCTC AAGCTACCAT GCCGACCTCC AGGCACAGGG CAAGGAAGTG AAATAA
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Protein sequence | MNRPERLQPG VKLRDADKVA RIPVKIMPSE RETMLRKPDW LRVKLPASNQ RITEIKQALR SNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDADEPVKLA KTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRALN PHIQIETLVP DFRGRIDVAL DILSTNPPDV FNHNLETAPA HYRKARPGAN YQWSLDLLKR FKERHPNIPT KSGLMMGLGE TNEEIIQVLK DLRAHDVNML TLGQYLQPSK FHLPVERYVS PQEFDELKVI AEDLGFSHAA CGPLVRSSYH ADLQAQGKEV K
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