| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2575 |
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| Symbol | |
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| ID | 4604822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3081949 |
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| End bp | 3083400 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781976 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_928447 |
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| Protein GI | 119775707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.687203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0756163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTCC AAGAGCGACG CAAACTGATG AGTAAAAAAC TCCATATCAA AACCTGGGGC
TGTCAGATGA ATGAGTACGA CTCATCCAAG ATGGCTGACT TGCTGGGCGA ATATCAGGGC
TACACCTTGA CCGAAGAGGC CGAGGAAGCA GACATCCTGC TGCTCAACAC CTGCTCAATT
CGTGAGAAGG CGCAGGAGAA GGTGTTTCAT CAGCTCGGTC GCTGGAAAAC CCTGAAAGAC
AAGAATCCGG ACCTTATCAT CGGCGTCGGC GGCTGTGTGG CTTCTCAGGA AGGCAAGGCC
ATCAAGGACC GCGCCCAATG CGTGGACATC ATCTTTGGCC CCCAGACCCT GCACCGTCTG
CCGGAAATGA TTGACCAGGT TCGCAGCGGC GAAAAAGCCG TGATTGACGT GTCCTTCCCG
GAAATCGAGA AGTTCGACCG TCTGCCAGAA CCCCGCGCCG AAGGCCCGAC CGCCTTTGTA
TCCATCATGG AAGGTTGCAG CAAGTACTGC TCTTTCTGCG TGGTGCCTTA CACCCGCGGT
GAGGAAGTCA GCCGTCCGAT GGATGACATC ATCCTCGAAA TCGCTCAGCT CGCCGAGCAA
GGCGTGCGTG AAGTGAACCT GCTCGGTCAG AACGTGAACG CCTACCGCGG CGCCAAGCAT
GACGGTGAAA TCTGTACCTT CGCCGAACTG CTGCGTCACG TTGCCGCCAT CGATGGTATC
GACCGTCTGC GCTTTACCAC CAGCCACCCG ATTGAATTTA CTCAGGATAT CATCGACGTT
TACGAAGATA CCCCTGAGCT GGTGAGCTTC CTGCACCTGC CGGTACAGTC CGGTTCCGAC
CGGATTCTCA CCGCCATGAA GCGTGGCCAC ATGGCTATCG AGTACAAGTC GATTATCCGC
CGCCTGCGCA AGGCCCGTCC GGACATTCAA ATAAGCTCCG ATTTTATCGT GGGCTTCCCC
GGCGAAACCG CCCAGGACTT CCAGGACACC ATGAAGCTGA TTGAAGATGT GAACTTCGAC
ATGAGCTTCA GCTTTATCTA CAGCGCCCGC CCGGGTACTC CGGCAGCCGA TCTGCCGGAT
GATGTGGATA TGGAAGAGAA AAAACAGCGC CTTGCTGATT TGCAGGAACT TATCAACCAG
CAGGCCATGC GTTACAGCCG TCAGATGATG GGCACAGTGC AGCGCATTCT GGTTGAAGGT
CCCTCGGTGA AGAACCCGAT GGAACTGCGT GGCCGCACCG AAACCAACCG GGTGGTCAAC
TTTGAAGGCC TGCACAAGCA CATAGGCACC TTCGTGGATG TGGAAATTGT GGACGTGTTC
CCCAACTCAC TGCGCGGCAA GTTTATCCGC GGCGAAGACG AGATGGACCT GCGCAAGAGC
CTTCGCCCGG AGGACATCCT CGCCAAGCAC CAAAAGGCAG ATGACTTGGG CGTGACCCAT
TTCAAGCCCT GA
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| Protein sequence | MWFQERRKLM SKKLHIKTWG CQMNEYDSSK MADLLGEYQG YTLTEEAEEA DILLLNTCSI
REKAQEKVFH QLGRWKTLKD KNPDLIIGVG GCVASQEGKA IKDRAQCVDI IFGPQTLHRL
PEMIDQVRSG EKAVIDVSFP EIEKFDRLPE PRAEGPTAFV SIMEGCSKYC SFCVVPYTRG
EEVSRPMDDI ILEIAQLAEQ GVREVNLLGQ NVNAYRGAKH DGEICTFAEL LRHVAAIDGI
DRLRFTTSHP IEFTQDIIDV YEDTPELVSF LHLPVQSGSD RILTAMKRGH MAIEYKSIIR
RLRKARPDIQ ISSDFIVGFP GETAQDFQDT MKLIEDVNFD MSFSFIYSAR PGTPAADLPD
DVDMEEKKQR LADLQELINQ QAMRYSRQMM GTVQRILVEG PSVKNPMELR GRTETNRVVN
FEGLHKHIGT FVDVEIVDVF PNSLRGKFIR GEDEMDLRKS LRPEDILAKH QKADDLGVTH
FKP
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