| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2571 |
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| Symbol | |
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| ID | 4606007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3078197 |
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| End bp | 3079288 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781972 |
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| Product | GTP-dependent nucleic acid-binding protein EngD |
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| Protein accession | YP_928443 |
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| Protein GI | 119775703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000069275 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.128339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTA AATGTGGCAT CGTTGGTCTG CCCAACGTTG GTAAATCAAC GCTCTTCAAC
GCGCTGACCA AGGCCGGTAT TGAAGCGGCA AACTTTCCGT TTTGTACCAT CGAGCCAAAC
ACCGGCGTAG TGCCAATGCC AGACCCACGT TTGGACGAAT TGGCCGCCAT TGTTAAGCCT
GAGCGTGTTA TCCCGACGTC CATGGAATTT GTGGACATCG CCGGTCTGGT TGCCGGTGCT
TCCAAGGGCG AGGGTCTGGG CAATAAGTTT TTGGCCAACA TCCGCGAAAC CGAAGCTATC
GGCCATGTGG TGCGTTGCTT CGAGAACGAA AACATTGTGC ACGTGGCTAA CCGCGTTGAC
CCGGCCGGTG ACATAGAAGT GATCAACACC GAGTTGGCGC TGGCAGATCT CGACAGCGTT
GAGCGTGCTA TTGTGCGTCA GCAAAAGCGT GCCAAAGGCG GCGACAAAGA AGCCAAGTTC
GAAGTCGATG TACTTGAAAA GCTGCGCCCT GTGCTGGATG AAGGCAAGAT GCTGCGCTCG
CTGGAACTGT CCAAGGAAGA GCTGGCTGCG GTGGCTTATC TGAACCTGCT GACCCTGAAG
CCAACCATGT ATATCGCCAA CGTGTCTGAA GACGGCTTTG AGAACAATCC GCATCTGGAC
GCCGTACGCG CCATTGCCGC CAAAGAAAAT GCCGTGGTAG TGCCTGTATG TGCCGCCATT
GAATCTGAAC TGGCGGAGAT GGATATCGAA GAGCGCGATG AGTTCATGGC AGATCTCGGT
CTAACCGAAC CAGGCCTTGA TCGCGTGATC CGCGCCGGTT ATGAGCTGTT GAACCTGCAA
ACCTATTTCA CCGCCGGTGT GAAAGAAGTG CGTGCCTGGA CCGTGTCTGT TGGCGCCAGC
GCGCCTCAGG CTGCCGGTAA AATTCATACC GACTTTGAGC GCGGATTTAT CCGTGCCCAG
GTAATCTCCT ACGAAGATTT TATTAACTTC AAGGGTGAGC AGGGCGCCAA AGAAGCTGGC
AAGATGCGTG TGGAAGGTAA AACTTACATC GTTAAAGATG GCGATGTGAT GCACTTCCTG
TTCAACGTCT AA
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| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPMPDPR LDELAAIVKP
ERVIPTSMEF VDIAGLVAGA SKGEGLGNKF LANIRETEAI GHVVRCFENE NIVHVANRVD
PAGDIEVINT ELALADLDSV ERAIVRQQKR AKGGDKEAKF EVDVLEKLRP VLDEGKMLRS
LELSKEELAA VAYLNLLTLK PTMYIANVSE DGFENNPHLD AVRAIAAKEN AVVVPVCAAI
ESELAEMDIE ERDEFMADLG LTEPGLDRVI RAGYELLNLQ TYFTAGVKEV RAWTVSVGAS
APQAAGKIHT DFERGFIRAQ VISYEDFINF KGEQGAKEAG KMRVEGKTYI VKDGDVMHFL
FNV
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