| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2569 |
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| Symbol | ipk |
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| ID | 4604816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3075156 |
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| End bp | 3076007 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781964 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_928441 |
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| Protein GI | 119775701 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0152545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.113925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCTG TATCCCTTGC CTGGCCGGCA CCGGCAAAGC TCAATCTGTT TTTGCACATC
AATGGCCGCT TACCCAATGG CTACCATGAA CTGCAAACCC TGTTTCAGTT TATCGACTAC
GGTGACTGGC TGGATTTTAA AATAACAGCA ACACCAGAGT TGAAACTGCA CTCCAACCTC
AGCCAAGTTG TCCCCGACAG CGATAACTTA ATTCTGAAAG CCGCAAAATC TTTGCAGAGC
GTCACAGGTT GTATACAGGG CGCCGAGATC TGGCTCGACA AGCGCCTGCC CATGGGCGGC
GGACTCGGCG GCGGTTCATC GGATGCCGCT ACCACACTGG TGGCGCTTAA CGCCCTGTGG
CAGCTGGGTT TGGACAAAAA AGCCCTGATG GATATCGGCC TGACTCTCGG CGCTGATGTG
CCTGTTTTTA TTAACGGAAT CGCGGCTTTC GCCGAAGGTG TCGGCGAAAA ATTACAGCCC
GTGGACGTAG CAGAGCCTTG GTATTTGGTG TTGATACCAG ACGCCCATGT ATCCACCGCC
GACGTATTTC AGCACCCTGA TTTACCTAGG AATACGCCCA AGCTGGACAT GTCATCACTA
AGCCCGGAAC GCTGGTCAAA CGACTGCCAG GCATTGGTCA GTGCCAAATA CCCCCAAGTT
GCCAATGCCT TAAGCTGGCT GGTAGAATAT GCGCCGTCCA GAATGACCGG AACCGGTGCA
TGCGTGTTCG GGGAATTCGG CTCGCAGCAG GCCGCGCTGG AGGCGTTGGC TAAAAAGCCA
GCTGAGATGC AGGGCTTTGT TGCGAAAGGA CTGAATCGTT CGCCGTTGGA GTTGAGACTC
GCTCAGCTTT AA
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| Protein sequence | MMSVSLAWPA PAKLNLFLHI NGRLPNGYHE LQTLFQFIDY GDWLDFKITA TPELKLHSNL
SQVVPDSDNL ILKAAKSLQS VTGCIQGAEI WLDKRLPMGG GLGGGSSDAA TTLVALNALW
QLGLDKKALM DIGLTLGADV PVFINGIAAF AEGVGEKLQP VDVAEPWYLV LIPDAHVSTA
DVFQHPDLPR NTPKLDMSSL SPERWSNDCQ ALVSAKYPQV ANALSWLVEY APSRMTGTGA
CVFGEFGSQQ AALEALAKKP AEMQGFVAKG LNRSPLELRL AQL
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