| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2566 |
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| Symbol | prfA |
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| ID | 4604813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3071948 |
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| End bp | 3073039 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781961 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_928438 |
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| Protein GI | 119775698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0384672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.342733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAT CCGTCATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAACGA AGAAGTATTG
GCGCTGCTCA GCGACGCCAG CATCATTTCC GATCAGGACC GTTTTCGCGC CCTTTCCAAA
GAATACGCCC AGCTTGAAGA CGTGGTAAAA GGCTTCAAGG CTTATCAGCA GGCGGTGGCC
GACCTGGAAA CCGCCAAAGA GATGCTCGAA GAGGACGATC CTGAGCTGAA AGAAATGGCC
CAGGAAGAAA TCAAATCCGC CAAGGCGAGC CTCGAGCGGC TCGAGGCCGA GCTGCAAATT
TTGCTGCTCC CTAAAGACCC CAACGATGAA GCCAACGCGT TTGTGGAAAT CCGTGCCGGA
GCCGGTGGTG ATGAAGCCGC CATTTTTGCC GGTGACCTGT TCCGCATGTA CAGCCGTTAT
GCCGAAACCC AGCGCTGGCA GGTGGAAATC ATGAGCGCCA ACGAAGGCGA ACATGGTGGT
TATAAAGAAG TCATTGCACG TTTCAGCGGT GAGCGCGTTT ACGGCAAACT CAAATTCGAG
TCCGGTGGCC ATAGAGTTCA ACGGGTGCCT GAAACTGAAT CCCAGGGTCG GGTGCACACC
TCGGCCTGTA CCGTAGCTGT GCTGCACGAA GTGCCCGAAG CCGAAGCGGT GGAAATCAAC
CCATCTGAAC TGCGCATCGA CACTTTCCGC GCCTCCGGTG CCGGTGGGCA GCACGTTAAC
AAAACCGATT CGGCCATCCG TATTACCCAC TTGCCCACAG GCACTGTGGT GGAGTGTCAG
GATGAGCGCT CGCAGCACAA AAACAAGGCT CGTGCCATGT CAGTGCTGGT GGCCCGTTTG
CAGGCTGCCG AAGACGAGAA GCGCCGCAGC GCCGAAGCCA CCACCCGACG GAATCTGGTA
GGAAGCGGCG ATCGTTCTGA ACGTATCCGC ACCTACAACT TCCCTCAGGG GCGGGTGAGC
GATCATCGCA TCAACCTGAC CCTGTATCGC CTCAATGAAG TGATGGAAGG CGATTTGAAC
GCCCTTATCG AACCCATAGT ACAGGAACAC CAGGCCGATT TGTTGGCGGC ACTGGCAGAC
GAGCAGGGGT AA
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| Protein sequence | MKESVIRKLE GLLERNEEVL ALLSDASIIS DQDRFRALSK EYAQLEDVVK GFKAYQQAVA
DLETAKEMLE EDDPELKEMA QEEIKSAKAS LERLEAELQI LLLPKDPNDE ANAFVEIRAG
AGGDEAAIFA GDLFRMYSRY AETQRWQVEI MSANEGEHGG YKEVIARFSG ERVYGKLKFE
SGGHRVQRVP ETESQGRVHT SACTVAVLHE VPEAEAVEIN PSELRIDTFR ASGAGGQHVN
KTDSAIRITH LPTGTVVECQ DERSQHKNKA RAMSVLVARL QAAEDEKRRS AEATTRRNLV
GSGDRSERIR TYNFPQGRVS DHRINLTLYR LNEVMEGDLN ALIEPIVQEH QADLLAALAD
EQG
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