| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2521 |
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| Symbol | |
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| ID | 4604768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3029669 |
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| End bp | 3030796 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639781916 |
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| Product | agmatine deiminase |
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| Protein accession | YP_928393 |
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| Protein GI | 119775653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.415458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAC GGGGATATAA GGACTTTGCG ATGAGCATCA ACACCCTAAA TTCGACCCCC
GCCGCCGATG GCTTCACCAT GCCAGCCGAA TGGGCACACC AGCAGGCTGT TTGGATGATC
TGGCCCTACC GCCCTGACAA CTGGCGCGAA GCCGGTCGTT TTGCACAGGC GACCTTTGCC
AAGGTTGCCG ATGCCATTGG CGGCGCCACG CCTGTGTTTA TGGGGGTTCC GGCCGAGTTT
ATGGATAAGG CCCGCGCCAT CATGCCTGCC CACGTAACTC TGGTTGAGAT GAACAGCGAC
GACTGCTGGG CCCGCGATAC AGGCCCCACG GTAGTGACCA ATGGAGCCGG CGAGTGCCGT
GGCATTGACT GGGGCTTTAA CGCTTGGGGC GGCCACAAGG GCGGTCTCTA TTTCCCCTGG
GATCAGGATG AAAAAGTGGC AGCCCAAATG CTGGCCCAGC ACGGCATGGA CAGATACGCC
GCGCCGCTTA TCCTGGAAGG CGGCTCAATA CACGTGGACG GCGAAGGCAC CTGTATGACC
ACCGCCGAGT GCCTTTTGAA TGAAAACCGC AACCCGCATC TCACCAAAGA GCAAATCGAA
GCTCATCTTC GCGATTATCT TGGTGTAACC AGCTTTATCT GGCTGGGTGA CGGCGTGTAT
ATGGACGAGA CCGACGGTCA TATCGACAAC ATCTGCTGTT TTGTCCGCCC CGGCGAAGTG
GCCCTGCACT GGACCGACGA TGTGAACGAC CCACAATACG AGCGCTCTGT GGCTGCGCTC
AAGCTGCTTG AAGCCGCCGT GGATGCCAAA GGCCGCAAAC TGAAGGTGTG GAAGCTGCCT
CAGCCAGGCC CGCTGTACTG CACCGAAGAA GAGTCGGCCG GCGTTGAGAG CGGCACCGGT
GTGCCCCGTG AGGCCGAAGG TCGTCTGGCG GGTTCCTATG TGAACTTCCT TATCACCAAC
GACCGTATCG TCTACCCGCT TTTGGACGAA GCCACCGACG GTGAAGCGCA GCGCATTCTG
GAAGACATCT TCCCTGAGTA TCAGGTTATC GGCGTGCCTG CCCGTGAGAT CCTGCTTGGC
GGTGGCAACA TCCACTGCAT TACCCAGCAA ATCCCATCCG GCAAATAA
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| Protein sequence | MPARGYKDFA MSINTLNSTP AADGFTMPAE WAHQQAVWMI WPYRPDNWRE AGRFAQATFA
KVADAIGGAT PVFMGVPAEF MDKARAIMPA HVTLVEMNSD DCWARDTGPT VVTNGAGECR
GIDWGFNAWG GHKGGLYFPW DQDEKVAAQM LAQHGMDRYA APLILEGGSI HVDGEGTCMT
TAECLLNENR NPHLTKEQIE AHLRDYLGVT SFIWLGDGVY MDETDGHIDN ICCFVRPGEV
ALHWTDDVND PQYERSVAAL KLLEAAVDAK GRKLKVWKLP QPGPLYCTEE ESAGVESGTG
VPREAEGRLA GSYVNFLITN DRIVYPLLDE ATDGEAQRIL EDIFPEYQVI GVPAREILLG
GGNIHCITQQ IPSGK
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