| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2502 |
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| Symbol | |
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| ID | 4604749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3003539 |
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| End bp | 3005488 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781897 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928374 |
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| Protein GI | 119775634 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.988754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA GCCTCCGGCT ATCTCAGCAG CTCTATTATT CCTTTGGTGT TGTGATTGTT
CTCTTATTGG TTGTCACAGT GGCCGGATAT CGGGGATTGA CTGAGGGTTT CAAAAACTTT
ACTGAATATC GGCTGCTGGC CAGTAGCTCA AATGCAGCCA GCGAAGCTGA AGCCACCTTG
CTCCGAGCTC AAGTTGACGT GTTCAGATAC CTTAACACGC CCGATAACAC GACTTACCAG
TCATTTCAGA AAAATATTGC TGAGCTTAAT CAGGATATTA GCCATGCCAA GGAATTGGAG
CTCGATGCCG GTCGAGATAG TCTTCTGGCG CAGGCTGATG GGTTGGTAAA AAACTATGCA
TCCACCTTTG AGGCCATAAC AGGTGATTTT GCGGCTCGCA ACCAGGTGGT GCGGGATTTG
CTGGACCCAG CCGGGCTGAG CATGCGCGAA AACGTAACCG ATGTGATTAC CGCCATGTAT
CAGGAAGGGG ACGCTGACGG CTTGTTTGTT GCAGCAAGGA GCCAGGAAAA ACTGATGCTT
GCCCGGCTTT TTGCTTCCAA CTTTCTGATC TCCAACAGAG AAGAGGACTA TAAGCGGGCG
TTGCAGGAAC TCTCTGCCCT CGACGGCACC ATTAATGGCC TGAAAAGTGT TGAAAGTGCG
ACTGTCATTG CTGACAAGGT GGAAGGTATT GATACAGGAC GGACTCAATA TCGTGATGCG
CTCAAAGCGG TTTACGGCAT TATTCAAAAT CAGAACGGGC GCATCGATGA GGGGCTGAAT
GTTATAGGTC CCAAAGTGGC AGCTGTACTC CAGGAATACA ATAAAGCGAT TGAGCAGCAG
CAGGGTGAAC TTGGGCTCTA CGCCCAGCAG AAAAGTGAAA ATGCCATCGA TACGGTTGTG
GTGGTCGCCA TAGCAGCGAT GCTGATGGCT ATTTGGCTGG CCATTACTGT GGTGCGTGCT
ATTCGTCGGC CTGTGGGTGG CGAACCCAGA GAAATAGCAT CCATTGCCCG TGAGATAGCC
GGTGGAAACC TGGGGCAGAA TTTCCTACGT GAGGGAAGTA CAGGTATTTA TGCGGCTATG
GCGGAGATGA ATGATAATCT GCGGCGTATC GTCAGCGAGC TTAACGATGC GTCCCGTACC
CTGGGTGATT CCTCCAGTGG CATGCTTGGG GTAACCGAAG AGAGCCGGAA GAACTCTGAA
TCCCAAGCCG ATCAGTTGGC GCACACGGCT TCGGCCATGC AGGAGATGAC CCATACTGTA
GATGACATTG CCAGAAACGC CCAGCGCGCG TCTGAAATGG CATCTGAGGC CGATCATCAT
GCCCAGGAAG GCATGGGCGT GGTGGAAGAT ACCCGCCGCA GCATCATGGT GCTGGTGGAC
AATATCACCG ATGTCAGCGG CATTATCGAG AACCTGGAGA AAGAAACCGA AAACGTCGGT
TCTATACTGG ATGTTATCCG GGGTATTGCC GAGCAAACCA ACCTGTTGGC GCTCAATGCA
GCCATTGAGG CGGCCCGCGC TGGCGAACAG GGACGCGGCT TTGCGGTGGT GGCCGATGAG
GTGCGGAATC TTGCCAGTCG AACCCAAAAC AGCACCGAAG AAATTCAGGC CCTGATTGGC
CGCTTGCAGG CCGAGTCCCG CCGTTCGGTT GAATCCATGC GGGTCAATGT AACGGAAGCC
ACTCAAACGT CAGAAAAGGC CAATAAGGCT ATTGCTGCCC TCGGGGCGAT TGCCGATTCA
GTCATGGCAA TTCGCGATAT GAACCATCAG ATTGCAGTGG CAGCAGAAGA GCAGGCAACC
GTAGTGGGTA CCATTAATGT GAGTGTGGAA GAAATAAGTG GACTGGCTCG GATGAATGCC
GCAGGCAGTG AACAGGTACA AAATTCGGCC AATGGGATCA GCGAAATATC CAGTAAACTC
AGTGGTATAG TCGGTCGATT CAAGCTCTGA
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| Protein sequence | MFSSLRLSQQ LYYSFGVVIV LLLVVTVAGY RGLTEGFKNF TEYRLLASSS NAASEAEATL
LRAQVDVFRY LNTPDNTTYQ SFQKNIAELN QDISHAKELE LDAGRDSLLA QADGLVKNYA
STFEAITGDF AARNQVVRDL LDPAGLSMRE NVTDVITAMY QEGDADGLFV AARSQEKLML
ARLFASNFLI SNREEDYKRA LQELSALDGT INGLKSVESA TVIADKVEGI DTGRTQYRDA
LKAVYGIIQN QNGRIDEGLN VIGPKVAAVL QEYNKAIEQQ QGELGLYAQQ KSENAIDTVV
VVAIAAMLMA IWLAITVVRA IRRPVGGEPR EIASIAREIA GGNLGQNFLR EGSTGIYAAM
AEMNDNLRRI VSELNDASRT LGDSSSGMLG VTEESRKNSE SQADQLAHTA SAMQEMTHTV
DDIARNAQRA SEMASEADHH AQEGMGVVED TRRSIMVLVD NITDVSGIIE NLEKETENVG
SILDVIRGIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRNLASRTQN STEEIQALIG
RLQAESRRSV ESMRVNVTEA TQTSEKANKA IAALGAIADS VMAIRDMNHQ IAVAAEEQAT
VVGTINVSVE EISGLARMNA AGSEQVQNSA NGISEISSKL SGIVGRFKL
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