Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2487 |
Symbol | |
ID | 4604735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2990074 |
End bp | 2990988 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781883 |
Product | glutaminase |
Protein accession | YP_928360 |
Protein GI | 119775620 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2066] Glutaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.702442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGC AGGCTCTGCT TGACGACCTG GTCGCCAAAG TTAGACCCTT GCTTGGGCAG GGCAAGGTGG CGGATTACAT TCCGGCCCTT GCCCGGGTCT CCCCCTATAA GTTGGGCATT GCGGTAACCA CCATTGATGG TACCACCCTG GGGGCGGGCG ATTGGCAAGA AGCCTTTTCC ATTCAAAGTA TTTCCAAAGT ATTCAGCCTT ACCGGCGCAA TGATGCTCTA TGAAGAGCGT GAGATTTGGT CGCGGGTAGG TAAAGAGCCG TCAGGTCACT CTTTTAACTC GCTGGTTCAG GTTGAACTTG AGCGGGGCAT TCCACGTAAT CCCTTTATCA ACGCCGGCGC TCTGGTGATA GCCGATTTGT TGCAAAGCCG CTTGGGTGCG CCCAAACAGC GGATGCTGGA AATAGTGCGT ATGCTGAGCC AGAACCACAA AGTCTGTTAT GACAAGGTGG TGGCCGACTC TGAATACCAG CACAGCGCCC GTAATGCTGC CATCGCCTTT TTGATGAAGT CTTTCGGCAA CTTCCATAAC GATGTGGACA AGGTGCTCCG AAGCTATTTC CATTACTGCT CACTCTCCAT GAGCTGTGCC GATCTCTCCC GCGCCATGGT GTATCTGGCC AACCAGGGCG TTAGCCTGGA TGGCAATGAG GTGGTATCGC CCACCCAAAC CCGGCGCCTG AATGCGCTGC TTGCCACATC AGGGCTCTAT GATGGGGCAG GGGAGTTTGC CTACCGCGTG GGTATGCCGG GTAAAAGCGG TGTGGGTGGC GGAATTATTG CGGTGATCCC CGGCGACATG TCGGTATGTG TGTGGTCGCC GGCCCTCGAT GCCAGTGGTA ACAGCTTGGC GGGTACCCGT CTGCTTGAGC TGTTGGCACA GGAACTTGGC CGTTCAATCT TCTGA
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Protein sequence | MLEQALLDDL VAKVRPLLGQ GKVADYIPAL ARVSPYKLGI AVTTIDGTTL GAGDWQEAFS IQSISKVFSL TGAMMLYEER EIWSRVGKEP SGHSFNSLVQ VELERGIPRN PFINAGALVI ADLLQSRLGA PKQRMLEIVR MLSQNHKVCY DKVVADSEYQ HSARNAAIAF LMKSFGNFHN DVDKVLRSYF HYCSLSMSCA DLSRAMVYLA NQGVSLDGNE VVSPTQTRRL NALLATSGLY DGAGEFAYRV GMPGKSGVGG GIIAVIPGDM SVCVWSPALD ASGNSLAGTR LLELLAQELG RSIF
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