| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2485 |
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| Symbol | |
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| ID | 4604733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2987708 |
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| End bp | 2988649 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781881 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_928358 |
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| Protein GI | 119775618 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.434999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAC TGTTAGAACC CATTGCTATT TTTACCCATG TAGCCAGAGC CGGCAGTTTC
AGCGCCGCGG CAAGAAAACT CGGGATTTCC AAATCCAAGG TGAGTACCCA GGTGGCCGAT
TTGGAACATA AACTGGGGGT TCAGCTTATT CAGCGTACTA CCCGCAGTTT GAGCCTGACC
GAGGCCGGAC ATCTGCTGTA TGTACAGGGT GAAGAGTTGC TGCGCGATGC CGATCAGGCA
GTCGCCAGCG TTCATAACCT CAATGATGCT ACCCGTGGGG TCTTGAAAGT CGGTATCTCC
CAATCCTTCG GTACCATGCA CATTATTCCG GCCTTGCCTG AGTTTATGGC AAGACACCCA
GAGCTTGAGC TGCAGGTGAG TCTGCTGGAC CACAAAGTGG ATGTGGTTAG CGAAGGCCTG
GATCTGTTGC TGACCATGTC TGAGCAATTG CCTCTTGGTA TGGTTGCCAG ACCTTTAATG
AAGTGTCAGT TCCTGCTGGT GGCCTCTCCC GAGTACATTG CCCGCCATGG TGAGCCAAGC
CGCCCCGAGC AGTTGGTTGA TCATAATTGT CTCGTGTATC ACGGTGAGTG GCATGAACAC
AGTGTATGGC AATTCAAACG TGGCGATGAT TACTGTGAAA TAGGCGTTTC GGGTAATTTC
CGGGTAGACA ATGCACCGGC GCTCAAGTCG GCAGCTGTCA GCGGGCTCGG CGTTGTGTAT
CTCGCCAGTT ATCTGATGGA AGATGAAATC AACAAGGGCA CCCTGGTGCC TCTGCTGCGT
GATTGGCAGC TGACCCATCA CCTGCCATTG CAGGCAGTTT ATCCCCGCCG TAAACATCTG
GCACCCAAGG TAAGTTCATT CATCGACTTC ATAAAAAATC ACATAGGTAC ACCGCCATAC
TGGGATGCGC CTTATCAGTC ACTGTATGAC GAACGGCGAT AA
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| Protein sequence | MLELLEPIAI FTHVARAGSF SAAARKLGIS KSKVSTQVAD LEHKLGVQLI QRTTRSLSLT
EAGHLLYVQG EELLRDADQA VASVHNLNDA TRGVLKVGIS QSFGTMHIIP ALPEFMARHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP EYIARHGEPS
RPEQLVDHNC LVYHGEWHEH SVWQFKRGDD YCEIGVSGNF RVDNAPALKS AAVSGLGVVY
LASYLMEDEI NKGTLVPLLR DWQLTHHLPL QAVYPRRKHL APKVSSFIDF IKNHIGTPPY
WDAPYQSLYD ERR
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