Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2483 |
Symbol | |
ID | 4604731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2984015 |
End bp | 2985154 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781879 |
Product | oxygen-independent coproporphyrinogen III oxidase, putative |
Protein accession | YP_928356 |
Protein GI | 119775616 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.274904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTTG AACTGCCTCC TCTGAGCCTT TATGTCCACA TCCCCTGGTG TGTGCAAAAA TGCCCCTATT GCGACTTTAA CTCCCACGGA AAACAAGGCG ATTTACCCCA GGAAGCCTAC GTCGATGCGC TGCTGGCAGA CCTTGATGCC GATTTGAATT ATGTCCAGGG ACGTACGCTT TACAGCATTT TCATCGGCGG CGGCACCCCG TCGCTGTTTG ATGCCAGCGC CATCGGCCGC CTCCTCGACG GTATTAAGGC CCGCATCCCC TTTTGTGATG ACATAGAAAT CACCATGGAA GCCAATCCGG GCACTCTGGA GCACGATGAT TTCAGCGCTT ACCGCGGGGC AGGCGTCACC CGCCTCTCAG TGGGCGTACA GAGCTTCAGC AAGGACAAGC TTAACCTCCT TGGCCGCATT CACGGGCGCG ATGAGGCAAC CCGGGCGGCA GAGCTTGCCA CTGCCGCTGG CTATCAGAGC TTTAACCTGG ATTTGATGCA TGGTCTGCCC AATCAATCAT TTGATGAGGC CATGGCCGAT ATAGACACGG CGGCCAGCCT AAATCCTCCC CATCTGTCCT GGTATCAGCT CACCATCGAG CCAAATACTC TGTTTCACTC GCGGCCTCCG CAGTTGCCGG ACGACGAAGC GCTTTGGCAT ATCTACGAAC AAGGCCAGAA AAAGCTCGCG GCCCTGGGAT ATGAGCAGTA TGAGATTTCA GCCTACGCCA AACCGGGCTT TCAATGCCGT CATAATCTCA ATTACTGGCA GTTTGGTGAC TACCTCGGTA TTGGCTGCGG AGCCCACGGC AAGGTGACGA TCCCCACCGA AAACTGCATT ATTCGAACGG TAAAAATAAA ACATCCCAAG GGATACCTGG CAGCCAGCGA TTATCTGTCT GAACTGACAC AAGTGCAGGA AGAAGACCGC CCACTTGAAT TTTTGATGAA CCGCTTGAGG CTGATGACCC CCATCGCCAA ACGTGAATTT GAATCCCGCA CCGGCCTGAA TGCCAGCCTG CTTGATGAAG GGATGGCACA GGCGAGCGAA AAAGGCCTTA TCGTACTTGG CGACGAGAGT TGGACCCTGA CCCCAAAGGG CCACATGTTC GTTAACGACT TACTGTCCCA TTTTCTCTGA
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Protein sequence | MKLELPPLSL YVHIPWCVQK CPYCDFNSHG KQGDLPQEAY VDALLADLDA DLNYVQGRTL YSIFIGGGTP SLFDASAIGR LLDGIKARIP FCDDIEITME ANPGTLEHDD FSAYRGAGVT RLSVGVQSFS KDKLNLLGRI HGRDEATRAA ELATAAGYQS FNLDLMHGLP NQSFDEAMAD IDTAASLNPP HLSWYQLTIE PNTLFHSRPP QLPDDEALWH IYEQGQKKLA ALGYEQYEIS AYAKPGFQCR HNLNYWQFGD YLGIGCGAHG KVTIPTENCI IRTVKIKHPK GYLAASDYLS ELTQVQEEDR PLEFLMNRLR LMTPIAKREF ESRTGLNASL LDEGMAQASE KGLIVLGDES WTLTPKGHMF VNDLLSHFL
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