| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2465 |
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| Symbol | |
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| ID | 4604714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2971790 |
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| End bp | 2972617 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781862 |
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| Product | putative small-conductance mechanosensitive channel |
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| Protein accession | YP_928339 |
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| Protein GI | 119775599 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.404234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATA TCCAAGGATT AATCGATCAG GCTCCAGAAC TGATCATGAC CTACGGTCTG
AAAGTCATTT TTGCCATTAT CATTTTCCTG GTCGGTAAGT ACTTCTCCAA TTTGGTGAAG
AAGTTAACCA CCAAGATGCT GAACAACCGC AAGGTTGACC CAACAGTAAC CTCGTTTGTA
GCCAACCTGG CGTGGGCAGT GGTGTTTGTT TTTACCGTTA TCGCCACCCT GGGGCAAATC
GGTGTACAGA CAGCCTCTCT GGTTGCTGTT ATCGGTGCCG CCGGTCTGGC TGTGGGTTTG
GCACTGCAGG GCTCTTTGTC GAACTTTGCT GCCGGTGTAC TTATGGTGCT GTTCCGCCCA
TGCCGCGTGG GTGACTACAT CGAAGCGGCC GGCATTGCCG GTACCGTGGA TGAAATCACC
ATTTTCTCGA CCAAGCTGCG TACCCCCGAT AACAAGGTTA TCGTTGCGCC CAACTCTGCC
ATCATGAATG GCACCATCAC CAACTACTCT GCCATGGACA CGCGCCGTGT AGACATGGTG
ATTGGTGTTG CCTATGACGC CGATATCAAG CTGACCAAGA AAGTCCTGAC CGACATTCTG
GACAACAATC AGTATGTGCT GAAAGACCCT GCGTATACCG TTGCTCTGAG CGAACTGGGT
GCTTCTTCTA TAAACTTTGT GGTGCGTCCC TGGGTTAAGG GTGCCGATTT CTGGGCAGCC
AAGTTTGAAC TGACCGAGCA GATCAAAAAT GCCCTCGATG CCAACAACAT TGGTATCCCA
TACCCTCAGA TGGATATCCA TGTGAAGGAA TTACCTGCGG CCAAGTAA
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| Protein sequence | MDNIQGLIDQ APELIMTYGL KVIFAIIIFL VGKYFSNLVK KLTTKMLNNR KVDPTVTSFV
ANLAWAVVFV FTVIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA AGVLMVLFRP
CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSA IMNGTITNYS AMDTRRVDMV
IGVAYDADIK LTKKVLTDIL DNNQYVLKDP AYTVALSELG ASSINFVVRP WVKGADFWAA
KFELTEQIKN ALDANNIGIP YPQMDIHVKE LPAAK
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