Gene Sama_2455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2455 
Symbol 
ID4604704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2962455 
End bp2963603 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID639781852 
Productalcohol dehydrogenase II 
Protein accessionYP_928329 
Protein GI119775589 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGA AATTTTTTAT CCCTTCTGTT AACGTGCTCG GCCAGGGCGC CGTAGACGAG 
GCCATCGGTG ACATAGTCAC CCTGGGTTTT AAACAGGCCC TGATAGTCAC AGATAAACCT
TTGGTACAGA TAGGTATTGC CGGTGAACTG GTGGAAAAAC TCGGTGAGCG CGGTATTACC
GCCGTCGTGT TCGATGGTGT ACAACCCAAC CCCACAACAG CCAACGTGGA GGCGGGCCTT
GCACTGCTCA ACGCCCATGG CTGTGACTTT GTGATTTCCC TCGGCGGCGG CTCGCCCCAC
GACTGCGCCA AGGGCATCGC CCTGGTCGCC ACCAATGGCG GCAGCATCAA AGACTACGAA
GGCGTCGATA AGTCCGCCAA GCCACAGTTG CCCCTGGTTG CCATCAATAC TACCGCCGGC
ACCGCCAGTG AAATGACCCG CTTTTGCATC ATCACCGACG AGGCTCGCCA TATTAAAATG
GCCATCGTCG ACAAGCACAC CACCCCCATT CTGTCGGTGA ACGATCCTGA GTTGATGGTG
AAAAAGCCAG CTGCCTTGAC CGCGGCCACC GGGATGGATG CCCTGACCCA CGCCGTTGAG
GCTTATGTGT CTGTTGCCGC CAATCCCATC ACAGATGCCT GCGCCATCAA GGCCATCGAG
CTTATTCAGC AATACCTTGA GCGGGCGGTG AAACAGGGGC AGGACCTACA GGCCCGCGAG
CAAATGGCCT ATGCCCAGTT CCTCGCCGGT ATGGCCTTTA ACAACGCCAG CCTGGGTTAT
GTGCACGCTA TGGCCCACCA GCTCGGTGGC TTCTACGACC TGCCCCACGG TGTCTGTAAC
GCCCTGTTGC TGCCATACGT GCAGGAATAC AACGCGGCGG TGGCGGCGGC ACGTTTGAAA
GATGTCGCCA AAGCCATGGG TGTTGCCGTA GACGGGCTTG ATGACCAAGA AGGTGCCAAG
GCCGCCATTA GTGCCATCAA GGCGCTGTCC AAGGCGGTAA ACATCCCGGA GAATCTGACT
GTGCTTGGCG TAAAAGAAGA GGATATTCCG TTACTGGCCG ACAACGCCCT CAAAGATGCC
TGCGGATTTA CCAACCCCAA ACAGGCCACC CATGAGGAAA TCTGTCAGAT TTTCTGTAAC
GCACTTTAA
 
Protein sequence
MAAKFFIPSV NVLGQGAVDE AIGDIVTLGF KQALIVTDKP LVQIGIAGEL VEKLGERGIT 
AVVFDGVQPN PTTANVEAGL ALLNAHGCDF VISLGGGSPH DCAKGIALVA TNGGSIKDYE
GVDKSAKPQL PLVAINTTAG TASEMTRFCI ITDEARHIKM AIVDKHTTPI LSVNDPELMV
KKPAALTAAT GMDALTHAVE AYVSVAANPI TDACAIKAIE LIQQYLERAV KQGQDLQARE
QMAYAQFLAG MAFNNASLGY VHAMAHQLGG FYDLPHGVCN ALLLPYVQEY NAAVAAARLK
DVAKAMGVAV DGLDDQEGAK AAISAIKALS KAVNIPENLT VLGVKEEDIP LLADNALKDA
CGFTNPKQAT HEEICQIFCN AL