| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2445 |
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| Symbol | |
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| ID | 4604694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2942391 |
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| End bp | 2943722 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781842 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_928319 |
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| Protein GI | 119775579 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATA CCCAAGCGAT GCTGGAAGCG CCTGTTTCAA GGCTCTTTTG GCGCTACACC
CTGCCAACCA TAGCGTCCAT GCTGGTTACC GGTATTTATG TCACCATCGA TGGCATGTTC
GTCGGGCATT TTCTTGGTGA AACCGGCCTT GCGGGCATTA TGCTGGCTTA TCCGGTGGGC
GCCCTGCTGT ATGCCGTCGG TGCCCTGATT GGCATGGGGG CCGGCGCTTT GGTATCCATC
AAGTTGGGTG AAGGCAAAAC GGCCAAGGCA AGGGAGCTCC TTGGGAATGC GTTCAGCCTT
GTGCTCTTGT CGGCGCTGTT TTTTACCCTG GTGGGTTCAG TCAGTGCCAG GCATATCCTT
ATCTGGCTCG GCGCCGAAGG GGAGGTGCTG GAAAGTGCCC ATGACTACCT GTTCTGGTAC
TTTGCGCTTT GCATTTTCCC ATTGATTTCC ATGGCGTTTT CAACCCTGCT TCGCAATGAC
GGCAAACCCG CTTTTGTGAC CTGGGTGCTG ATTGCCGGTG GGGTGATTAA TACCCTGCTG
GATTACCTCT TTATCGTGGT GTGGGACTTT GGCCTGGCCG GTGCGTCTGT GGCGACCATG
CTGTCTCAGG CTGTCACTGG CCTCTTGTGT TTGCAGCATT TCTTCAGTGG CAAAACAGCG
CTGCGAATCG ATTTTGAGCA GATGCGGCTT AAATTGGACA ACTGCCTGAA TATTTCCCGG
GTGGGGCTGC CAAGCCTGCT GATGAACCTG TATCTCTCTA TCGTGCTCAC GCTGCACAAC
ACTGCGCTCT TGTGGGTGGG AACGCCGCTG CACGTGGCTG CTTACGGGGT GGTGAGTTAC
ACCGAAGCGT TTTTCTATCT GATTTTTGAG GGCATAGCCC TTGGCTCTCA ACCTGTCCTC
AGCTTTAACG CCGGTGCCGG CCGCATGGAC AGGGTTCGCC AGACCCGTAA TCTGGCGATG
GCGGTGACCT TGCTGACAGC GGGGCTTGGC TTGCTGTTTA TTTACGGCAG ACCCGAGTGG
GCCCTCTACA TTTTTGCCGG CGATAATCCG GTGTTAAGCC CGGTAGCCAT TGAGGGAATG
CGGCTCTATT TTTGGGGGTT ACCCTTTGAG GGCCTGATTT TGGTGGGCGC GAGCTTTTTC
CAGGCCATCA ACAAGCCAAG AGAAGCCTCC ATTCTGACCG GCACCAAATT GCTGTTGATA
GCGGCGGTGA TATACAGCTT TGCCTGGCTG TTTGGTGTCC CCGGTGTCTG GGTGTCGCTG
GCCTGTGTCA GCAGCGTTCT TACCTTGTGG ATGGTGTACA GCCTGGTCAG GATAGACAGT
CAGTCCATGT GA
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| Protein sequence | MNHTQAMLEA PVSRLFWRYT LPTIASMLVT GIYVTIDGMF VGHFLGETGL AGIMLAYPVG
ALLYAVGALI GMGAGALVSI KLGEGKTAKA RELLGNAFSL VLLSALFFTL VGSVSARHIL
IWLGAEGEVL ESAHDYLFWY FALCIFPLIS MAFSTLLRND GKPAFVTWVL IAGGVINTLL
DYLFIVVWDF GLAGASVATM LSQAVTGLLC LQHFFSGKTA LRIDFEQMRL KLDNCLNISR
VGLPSLLMNL YLSIVLTLHN TALLWVGTPL HVAAYGVVSY TEAFFYLIFE GIALGSQPVL
SFNAGAGRMD RVRQTRNLAM AVTLLTAGLG LLFIYGRPEW ALYIFAGDNP VLSPVAIEGM
RLYFWGLPFE GLILVGASFF QAINKPREAS ILTGTKLLLI AAVIYSFAWL FGVPGVWVSL
ACVSSVLTLW MVYSLVRIDS QSM
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