| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2406 |
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| Symbol | |
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| ID | 4604655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2891733 |
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| End bp | 2894108 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781803 |
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| Product | ATP-dependent protease, putative |
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| Protein accession | YP_928280 |
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| Protein GI | 119775540 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA CAACTCTTGC CACCGACAAG CTGTACCGGG TATCGACCCT GGCGGGACTG
GCACCGGACT GCTTTTCCAC GGCCACCTTG CCGCCACTGG ATGACATTAT TGGCCAAGAG
CGTGCCCAGA GTGCGGTCGA GTTCGCCATG TCTATCCATG AGAAGGGCTA CAACATCTAC
GCCATCGGCC AAAACGGTCT GGGCAAGCGC ACCATGATGC TGAGGTACCT TAAACGTCAT
CATTTTGATG CCAATCAGCG CTTTGACTGG TGTTACGTAG CCAACTTCGA TGACAACCGG
GTGCCCCGGG TATTGCGTCT GCCTGCCGGT AAGGGCAACG GCTTTAAAAA AGACATCGAG
AAGCTGTCAC TTCGGCTGGT AAAGGCATTG CCGCTCGCCT TCGACAACGA GATGTATTAT
TCCCGCGCCG ACAAGCTGAA AACAGAGCTG TCGCGGCAGC AGGAAGCGGC GCTGACGGCA
CTCACCGAAG AGGCGAAAAA CAAGAGCATC AGCCTGTCGC TGTCGGTACA GGGCGATTAC
CAACTGATGG CCATGAACGG TGAAGAGCCC CACACCGAAG AAAGCTACAG CGCCCTGACG
GACGAAGAAC GTGAAGTCTT TGAAAACAGT ATAAAAGGTC TGGAAAAGCG CCTCAGGGGC
ATCATACGTC AGCTCACCGA GTGGGAAGAA GAGTTCTCGC AAAAACAGCA GGAGCACGAC
GAGCAGGTCG CCAAGGAAGT GCTGGCTCAC TTCTTTAAAC CCCTGAAGGC CAAGTATCGC
GAACTGGATG ATATCAAAGC CTTTTTGGGT GAGATGCAAA GAGATATCCT CGACAATCTG
GATATCTTTC TGGAAGAAAG TGAAGAGCAG CTGGGGCTGG CTTACGCGGC GCTGGATAAG
AAAATGCCCC GCCGCTACCA AATCAATGTG TTGGTGTGCC AGGACGAACA TAAGTTTCCT
GTGGTGGTGG AAGAAAGCCC CAACTACCAC AGCCTGTTTG GTTACATCGA AAATGCCACT
TTCAAGGGTA CTGTATTTAC CGACTTTTCG CTGATCCGTC CCGGCTCACT GCACAAGGCA
AACGGCGGCG TACTGCTGAT GGATGCCATC AAAGTGCTGG AACGACCTTA CGTATGGGAT
GGCCTGAAAA AAGCGCTGCG TTCCCGCAGT CTGGATTTGA ACAGCCTGGA GCGGGAAGTC
ACCCTGTCGG GCACCATATC GCTGGCGCCC GAACCCATTC CGCTGGATGT GAAGATCATT
CTTTTTGGCG ACTACCAGAC CTATCAACTG CTTCAGCAAT ACGACCCTGA CTTCAATGAG
CTGTTCAGGG TAACGGCCGA CTTTGAGGAC GTGATGCCAA GGCATGATGA GTCCGAAGCC
CTCTATGCAC GCTTTATCTC ATCCATAGTG CACGATAACA ACATGCTGCA CTGCAATCGC
TCGGCACTGG CCCGAATTAT CGAGTATTCC AGCCGCCAGG CAGATGACCA GACCCGCCTT
TCACTGCATT CGGCCAACAT CGCCAACCTG CTGAGGGAAA CCAACTACTG CGCCAACAAT
GTCGGCGCCA GCGAGATAGG TCGCGAGCAT GTGGAGATGG CACTGAGAAA TCAGGAACTC
CGGGTGTGCC GTCTGAAAGA CATGGTGATG CAGCAGTTTC ACAGCGGCCA GACGCTCTTC
AGTGCTGAGG GCGCCGTTAC CGGCCAGGTG AATGCCCTGT CGGTGATTTC CACAACGGAT
CATGAGTTCG GCGCACCAAA CCGTATCACC GCCACTACCG CCTACGGGAA AGGGGAAGTG
CTGGATATTG AGCACAAGGT GCGACTTGGC GGCCGTATCC ACAGCAAGGG CGTATGGATC
CTCACCGCCT ATCTGTCGTC TCTGCTGGGT AAGCAAAGGC CTATTCCACT CACCACCTTC
CTGACATTTG AGCAATCCTA CAGCGGTGTG GATGGCGACA GCGCGTCCAT GGCGGAATGC
TGCGCCATCG TATCGGCCAT CAGCGGTGTG CCAATCCGTC AGGATCTGGC CATCACAGGT
TCCATGAACC AGTTTGGTGA GTCCCAACCC ATCGGCGGTG TGAACGAGAA AATAGAAGGC
TTTTATGATG TTTGTGGCAT CAAGGGCCGT ACCGGCACCC AGGGCGTGAT AATTCCATCG
AGTAACGTGA AAAACCTGAT GCTGAGAAGC GATATAGTCG ATGCGGCGGG TCGCGGTGAG
TTTCACATCT ATGCCGTGGA CCATGTGACC GAAGCCATGG CGCTGCTGAC CGGGCTTGAA
GTGGGTAACG TGGATGATGC CAGCTTCGAT ACCCTGCTCG GACGGGCTGT GTCGCGGCTC
ACTGTGCTGG GCAAACATAA ACTCGACAAC GATTGA
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| Protein sequence | MAITTLATDK LYRVSTLAGL APDCFSTATL PPLDDIIGQE RAQSAVEFAM SIHEKGYNIY
AIGQNGLGKR TMMLRYLKRH HFDANQRFDW CYVANFDDNR VPRVLRLPAG KGNGFKKDIE
KLSLRLVKAL PLAFDNEMYY SRADKLKTEL SRQQEAALTA LTEEAKNKSI SLSLSVQGDY
QLMAMNGEEP HTEESYSALT DEEREVFENS IKGLEKRLRG IIRQLTEWEE EFSQKQQEHD
EQVAKEVLAH FFKPLKAKYR ELDDIKAFLG EMQRDILDNL DIFLEESEEQ LGLAYAALDK
KMPRRYQINV LVCQDEHKFP VVVEESPNYH SLFGYIENAT FKGTVFTDFS LIRPGSLHKA
NGGVLLMDAI KVLERPYVWD GLKKALRSRS LDLNSLEREV TLSGTISLAP EPIPLDVKII
LFGDYQTYQL LQQYDPDFNE LFRVTADFED VMPRHDESEA LYARFISSIV HDNNMLHCNR
SALARIIEYS SRQADDQTRL SLHSANIANL LRETNYCANN VGASEIGREH VEMALRNQEL
RVCRLKDMVM QQFHSGQTLF SAEGAVTGQV NALSVISTTD HEFGAPNRIT ATTAYGKGEV
LDIEHKVRLG GRIHSKGVWI LTAYLSSLLG KQRPIPLTTF LTFEQSYSGV DGDSASMAEC
CAIVSAISGV PIRQDLAITG SMNQFGESQP IGGVNEKIEG FYDVCGIKGR TGTQGVIIPS
SNVKNLMLRS DIVDAAGRGE FHIYAVDHVT EAMALLTGLE VGNVDDASFD TLLGRAVSRL
TVLGKHKLDN D
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