Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2394 |
Symbol | |
ID | 4604643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2876743 |
End bp | 2878422 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781791 |
Product | cyanophycinase-related exopeptidase-like protein |
Protein accession | YP_928268 |
Protein GI | 119775528 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4242] Cyanophycinase and related exopeptidases |
TIGRFAM ID | [TIGR02069] cyanophycinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.746369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAA AATTCCTCTC GTTTATCGGT GCTGTCGCCC TGTGGGTGTC AATCGCGCAC CCGATTGCGT CCGCTGCGGC CAAACCCTAC AACCCTGACA AAGCACCGGA AACAGCCAGG GAACCCGTCC CAACACTGTC GCTGATGCTG GCCGGTGGCG CCCTGTCTGT GTGCAGCTCC ATGAACCCAA AGTACTGCAC CGCTGACATA CATTTCCCGG ACAAGGCCAA AACCCGGCAT TTGTATGAGC TGAGTGAACA AAGTCTGTCC CGCTTTCAGG TCACTCCGGC CTGGGCACGA CTTAACGTCG ATACCCAAAG GGCATTGCTC GCCGCTCTTG GCTCTGCAGA TAGAGCCCTT CTCGATATCG AGGCACTTCA TGATCGGCTG GGCCCGCTTG GCAATACACT CAATGATGCC AGCTATTTTG CCCTGCTCGA CACCCTGGAG TGGGTACAGC TCACCCAGGA AGGAGAGCCA AAGACAGAGC AGGTTCGGCT GGAACAGGGT AAAAATGCCC AGGGCGCCTC ACACTTCGCC GCCTTTGTCA GCCGTGCGGC ACGGCAAGTC GGCCACCAGC CACCGAAAAT TGGCATAGTC ACGGCATCTG CAAGGGATCC GTTTGAAGCA GCCAGCTTTT ATCAACAAGC CTTTACTCAG GCGGGTGCAA TAGCCCAGTG GCTACCGTTA GACAGCGCGT TGCAGCAAGC CTGGGGGTAT GGCAATAGGG AAGCTGGATG CAAAGAGCTG GCAACCCTTG GTGAGAACTA TCAGGGCTAC CACGACAGGC AACGGGTGTA CCCGACTCTG TGGGATAAAT ACAATCAGGT TTGTCTCAAT CCAGAGGGGC TGCTGCGCAC GCTGGCCGCC CTGGATGGCC TCTTTCTCTC CGGCGGCGAT CAATCCCTCA CTTTGTCGGC TTGGCTGGGC GCCGATGGGC AACCGAGCGC CGCGCTGAAG CTGATAAAAG AGCGATTCGC AAATGGAGAG CTTATCATCG GTGGCACCAG CGCCGGTACC GCCGTGATGG CATCGGGTGC CATGATCACC GGGGGCACCA GCCAGGGCGC ATTGGACTTT GGCGTGGTCG CCGCGCCCCC CGTCAGTGAG CGATGCGAAG AACTGGGCTG CGAGGCGCTC AATCCTGCCG ACACCCTCAC CTACCGGCCC GGAGGCGGGC TGGGACTTTA TCCGTTCGGG GTGACAGATA CCCATTTCAG TGAAAGGGAC AGACAAATCA GGCTGGTACT GCTGCAGGAT ATAAGCCAAA CCGGCCTTGG GGTGGGCGTC GATGAAAATA CCGCCCTGTG GCTATCCAAA GATGGCCAAT ATGGTGTGAT CGAGGGCGAA GGCGGCGTCT GGTTCAGTGA GCCTGCAGCC AAAGGTCAAA CCCCGGATCC CCAAAAAGCG CAAATACACC AGAGCACGGC TCACAGCCAC ATCATCCACT ACCTTCCCCA TGGTACCCGG CTGACGTTAA CTCGCGATAA CATCAGGGCG GAAGGCACGC AGGAAGAGTT ACAAAAGGTC AGTTGCGACG GGTTTACAGC CGCTTGGCTG CCAAGCCAGG GATTCACCCT CCGCCACCTG GTTGACAGCC AATGTCATCC TCAGGGTTAT TACCAGTCAC TGGGGCTGGA GCACAGCACA GAGATGTCGT CAGATAAGGC GACTCACTAA
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Protein sequence | MTPKFLSFIG AVALWVSIAH PIASAAAKPY NPDKAPETAR EPVPTLSLML AGGALSVCSS MNPKYCTADI HFPDKAKTRH LYELSEQSLS RFQVTPAWAR LNVDTQRALL AALGSADRAL LDIEALHDRL GPLGNTLNDA SYFALLDTLE WVQLTQEGEP KTEQVRLEQG KNAQGASHFA AFVSRAARQV GHQPPKIGIV TASARDPFEA ASFYQQAFTQ AGAIAQWLPL DSALQQAWGY GNREAGCKEL ATLGENYQGY HDRQRVYPTL WDKYNQVCLN PEGLLRTLAA LDGLFLSGGD QSLTLSAWLG ADGQPSAALK LIKERFANGE LIIGGTSAGT AVMASGAMIT GGTSQGALDF GVVAAPPVSE RCEELGCEAL NPADTLTYRP GGGLGLYPFG VTDTHFSERD RQIRLVLLQD ISQTGLGVGV DENTALWLSK DGQYGVIEGE GGVWFSEPAA KGQTPDPQKA QIHQSTAHSH IIHYLPHGTR LTLTRDNIRA EGTQEELQKV SCDGFTAAWL PSQGFTLRHL VDSQCHPQGY YQSLGLEHST EMSSDKATH
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