| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2392 |
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| Symbol | |
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| ID | 4604641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2872278 |
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| End bp | 2873732 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781789 |
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| Product | hypothetical protein |
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| Protein accession | YP_928266 |
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| Protein GI | 119775526 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1288] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.294283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTAT CCAAACGGGA AATGCCGGAT GCCTTCATCA TCCTGATGTT GATGATGCTG
CTGGCATGGG GCCTGACCTT TATCGTGCCG GCAGGCCAGT TTATGTGGGT GACCGAGCAG
GGGATCCGGC TTGAAAATTT CAGCCTTCAG GCAAACGAGG GGCTTGGCAG CGCGCTTTTC
AGTGCAAACG GAACCCCTGG GCTGCTCAAT TCAGCATTTG ATGGGCTCAC CTCCGGCGGG
CGCGACAGCT CTGCCGTTGG TGTGGTGGCC TTTATTCTGA TTGTGGGCGG CGCTTTTGGT
GTGCTGCTGG CAAGTGGCGC GGTGCATCAG GCGCTGATGC TGCTGATAGC GCGCCTTAAA
GAGCGAGAAG CCCTGTTGCT GCCGGTGCTG TTTGTGGTGT TTTCGCTGAG CGGCGCCGTG
TACGGCATGA GCGAGGAGGC GATTGCCTTT TGCCTGCTGC TGATGCCGCT TTTCAGTGCC
CTGGGGTATC ATCCTGCCGT GGTGGTGCTG GTAACCTACG TGGCCACCCA GGTCGGCTTT
GCCACCTCCT GGATGAATCC CTTCAGTGTG GCCATTGCCC AGGGAATAGC TGGCTTGCCA
TTGATGTCGG GGGCGTGGCT TCGGGCCCTG TGCTGGGGGA TTTTTACCCT CTGCGCCCTG
GTGTATACGC TGCGTTTTGC CAAACACACG CGCCGCCAGA CTTTGGCTCT GGCAGCGGCT
CCGACAGCGG ATGCAAGTGT TACTCAGTCC CTGATGGCAG AGCCAAAACC AAAGCAGACG
AGCCTTAGCA AGGTCAATGT CGCCATTTTG CTGATTTTAC TGCTGACATT GGTTTGGGTG
ATTTGGGGAG TGGTGGCAGG GGGGTACTAT ATTGCCCAGA TTGCCAGCCA GTTCTTTGCC
ATGGCGATGG CGATTGGCTT GCTGCTGTGG CTCAGTGGCA CCATGACTTT GAATCAGGTC
TCCGGCGCCT TTCAGCGCGG CGCCGCCGAG CTGTTGCCTG CGGCGCTGAT AGTGGGCTTT
GCCAAGGGGC TGGTTATTCT GCTTGGCGGT GACAATCCGT CGGCGCCTTC GGTGCTCAAT
ACCTTGCTGT ACTCAGCGGG TGGCAGTATC GGACACTTGC CTGACTGGCT CTCGGCACAA
ATGATGCTGG TGTTTCAGTC GGTATTTAAT GTGTTTGTGT CGTCTGGTTC CGGCCAGGCT
GCGCTGACCA TGCCATTGAT GTCACCGCTG GCGGAGCTTG CCGGGCTCAG CAGACAGCTG
GCTGTGCTGT GTTTTCAGTT GGGTGACGGA CTGACCAACC TGATTATTCC AACCTCAGCC
TCTCTGATGG GCTGTTTGGG TGTAGTCAAA ATCTCCTTTG GACAGTGGCT TAAATTGATT
TGGCGATTAC AGGTGCTGCT GATGACTCTG GCCAGTGCTG CTGTGGGTAT TGCCGTTTAT
ACAGGATATA GCTGA
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| Protein sequence | MSLSKREMPD AFIILMLMML LAWGLTFIVP AGQFMWVTEQ GIRLENFSLQ ANEGLGSALF
SANGTPGLLN SAFDGLTSGG RDSSAVGVVA FILIVGGAFG VLLASGAVHQ ALMLLIARLK
EREALLLPVL FVVFSLSGAV YGMSEEAIAF CLLLMPLFSA LGYHPAVVVL VTYVATQVGF
ATSWMNPFSV AIAQGIAGLP LMSGAWLRAL CWGIFTLCAL VYTLRFAKHT RRQTLALAAA
PTADASVTQS LMAEPKPKQT SLSKVNVAIL LILLLTLVWV IWGVVAGGYY IAQIASQFFA
MAMAIGLLLW LSGTMTLNQV SGAFQRGAAE LLPAALIVGF AKGLVILLGG DNPSAPSVLN
TLLYSAGGSI GHLPDWLSAQ MMLVFQSVFN VFVSSGSGQA ALTMPLMSPL AELAGLSRQL
AVLCFQLGDG LTNLIIPTSA SLMGCLGVVK ISFGQWLKLI WRLQVLLMTL ASAAVGIAVY
TGYS
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