| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2368 |
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| Symbol | |
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| ID | 4604617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2845058 |
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| End bp | 2846179 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781765 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_928242 |
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| Protein GI | 119775502 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0106958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.379553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA AGAAGATCAA TTTGCTGGAC CTGGATTTGC CGGGACTGAA AGCGCTGCTG
ACTGAAATGG GCGAAAAACC CTTTCGTGCC CAGCAGATAA TGCAATGGAT CTATCATTTC
GGTGTCAGTG ACTTCGAACA GATGACCAAC ATTAATAAGG CCATGCGTGC CAAGCTTGCC
GCACGTTGTG AAATTGTTGC GCCTGAAATC ACCAGTTACC AAAAATCTTC TGATGGCACT
ATTAAGTTTG CCATTAACGT AGGGCAGGGG CAGGAAGTTG AGACGGTGTA CATTCCCGAG
GATGACCGCG CCACCCTGTG TGTATCATCT CAGGTGGGTT GTGCCCTTGA GTGTACCTTT
TGCTCCACCG CACAGCAGGG GTTTAACCGT AACCTGACCG TATCTGAAAT TGTTGGCCAG
ATTTGGCGGG TATCGCACTT TTTGGGCTTC CAGAAAGAAA CCGGCGAGCG CCCCATTTCC
AACGTGGTGA TGATGGGTAT GGGTGAGCCT TTGCTTAACC TCGCCAATGT GGTCCCTGCC
ATGAATATTA TGCTGGACGA CTACGGTTTT GGTTTGTCCA AGCGCCGTGT GACTTTGTCT
ACCTCCGGTG TGGTGCCTGC GCTGGATAAA CTTGGCGACG TAATTGATGT GGCGTTGGCT
GTCAGTATCC ATGCACCCAA TGACGAGCTT AGGGATGTGC TGGTGCCCAT CAATAAAAAG
TATCCGCTGC AGGAGTTTTT GGCTGCCATC CGTCGTTACC TCGAGAAGTC CAACGCCAAT
CGTGGTCGCG TGACTCTCGA GTACGTGATG CTGGACCATA TCAATGACAG CACCGACCAG
GCCCATGAAT TGGCCAAGTT GATGAAGGAT ACTCCCTGTA AAATCAACCT GATCCCCTTC
AACCCCTATC CAGGTTCCCC TTACGGGCGC TCGTCCAACT CCCGTATTGA CCGTTTTGCC
AAGGTGTTGA TGGAATACGA CTTGACCGTA ATAGTGCGTA AAACCCGCGG TGATGATATC
GATGCGGCCT GTGGTCAGCT CGCCGGGGAT ATCCGTGATC GCACCAAGCG TCTGGCAAAA
AAACGCATGC AAGAAAGCCA GATTTCAGTC ACAATGAATT AA
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| Protein sequence | MSEKKINLLD LDLPGLKALL TEMGEKPFRA QQIMQWIYHF GVSDFEQMTN INKAMRAKLA
ARCEIVAPEI TSYQKSSDGT IKFAINVGQG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF QKETGERPIS NVVMMGMGEP LLNLANVVPA
MNIMLDDYGF GLSKRRVTLS TSGVVPALDK LGDVIDVALA VSIHAPNDEL RDVLVPINKK
YPLQEFLAAI RRYLEKSNAN RGRVTLEYVM LDHINDSTDQ AHELAKLMKD TPCKINLIPF
NPYPGSPYGR SSNSRIDRFA KVLMEYDLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KRMQESQISV TMN
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