| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2364 |
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| Symbol | hisS |
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| ID | 4604613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2840656 |
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| End bp | 2841930 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781761 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_928238 |
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| Protein GI | 119775498 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00827358 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.389731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAACGACA TTCTGCCAAA CCAGTCTCCC
GTGTGGCAAA AGCTCGAAGC AGTGCTGCGC GATGCCGTTG CCGCCTTCGG TTACAGCGAA
ATCCGCACCC CCATCGTGGA AAGTACCGAT CTCTTTAAGC GCTCCATCGG CGAAGTCACT
GACATCGTTG AGAAAGAAAT GTATACCTTC GAGGACAGAA ACGGCGACAG CCTGACCCTG
CGCCCCGAAG GCACGGCTTC AACCGTGCGT GCCGGTAACG AGCACGGTTT GCTCTACAAC
CAGGAGCAAC GTCTGTGGTA CACAGGCCCC ATGTTCCGTC ACGAGCGTCC TCAGAAGGGA
CGCTATCGCC AGTTCCACCA GTTTGGTGTT GAGGTGTATG GCATTGCCAG TGCCGATATC
GATGCCGAAG TACTGATGCT GTCCAATATG CTGTGGCAAA AGCTGGGGCT GACCGAGCAT
GTGGTACTGG AAATCAACAC CCTGGGTGAC AGTGACGAGC GTGCAGCCTA TCGCGACGCT
TTGATAGCCT TCCTGGAAGT ACACAAAGAC AAGCTCGACG AAGACAGTCA GCGTCGTATG
TACAGCAATC CGCTGCGGGT ATTGGATACC AAAAATCCCG AAATCCAGGC CATTCTCGCT
GATGCGCCGG CTTTGATGGA CTACCTCGGT GAGGAGTCAA AGTCACATTT TTCTACCCTG
CGTGAACTCT TGGACGCTGT TGGCATCCAA TACCGGGTTA ATCCCCGTTT GGTTCGCGGG
CTGGATTATT ACAACCGGAC TGTGTTTGAA TGGGTCACCG ATAGCCTGGG TGCCCAGGGT
ACAGTGCTCG CCGGTGGTCG TTACGATGGT CTTGTGGGCC AGTTGGGCGG TAAAGATACC
CCTGCCGTGG GCTTTGCCAT GGGGCTTGAG CGCATTGTGC TCTTGCTGGA AACCCTGGAG
CTTGCCAAGG ATGTACCGGC CGCAGTGGAT GTGTATGTTA CTGCCATGGG CGACAGCTGT
GTACCGGCGG CCTTTGCCAT TGCCAACGAG CTTCGCGTGG CGCTGCCCGG GGTGCGCATC
ATGACCCACT GCGGTGGTGG TAACTTCAAG AAACAAATCA AACGCGCCGA CAAGAGCGGC
GCAGCCCTGG CCCTTATCAT TGGTGATAAT GAGCTGGCCG AGGGTAAGGT GGCCATCAAG
CCGCTTCGCA ATGACAACGA ACAACAGCTG GTGGCTCGTG AGGCGCTGGC AGAAACAATT
AAAGCATTGA TTTAA
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| Protein sequence | MAKQIQAIRG MNDILPNQSP VWQKLEAVLR DAVAAFGYSE IRTPIVESTD LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYTGP MFRHERPQKG
RYRQFHQFGV EVYGIASADI DAEVLMLSNM LWQKLGLTEH VVLEINTLGD SDERAAYRDA
LIAFLEVHKD KLDEDSQRRM YSNPLRVLDT KNPEIQAILA DAPALMDYLG EESKSHFSTL
RELLDAVGIQ YRVNPRLVRG LDYYNRTVFE WVTDSLGAQG TVLAGGRYDG LVGQLGGKDT
PAVGFAMGLE RIVLLLETLE LAKDVPAAVD VYVTAMGDSC VPAAFAIANE LRVALPGVRI
MTHCGGGNFK KQIKRADKSG AALALIIGDN ELAEGKVAIK PLRNDNEQQL VAREALAETI
KALI
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