Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2360 |
Symbol | xseA |
ID | 4604609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2835793 |
End bp | 2837136 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781757 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | YP_928234 |
Protein GI | 119775494 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.203365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.598645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCC CTAAAAATGA TGTTTATACC GTGTCCCGCC TCAACGGCGA AGTACGGCAA CTTCTGGAGG GACAGTTGGG GCGGATTTGG CTGACCGGCG AGATCTCCAA TTTCTCTTCT CCTTCATCCG GCCACTGGTA CCTCACCCTC AAAGACAGCC ATTCGCAGCT GCGCTGTGCC ATGTTCAAGG GGCGTAACAC CACAGTGGCA TTCAAGCCCA TCAACGGCCA GCAGGTGTTG GTGCGTGGCA GTATCAGCGT GTATGAACCC AGAGGCGACT ATCAGCTGCT GATTGAAGCC ATGTTCCCCG CTGGGGATGG CTTGCTGGCG GCCCAGTTTG AAGCCCTGAA GATGAAACTT GCCGCCGAAG GTTTGTTTGC CCAGGACACC AAGCGGCCGC TGCCCGAGTC AATTCAGCGC ATTGGGGTTA TCACCTCCCC AACAGGCGCG GCCATCCGCG ATGTGCTCCA TGTGCTGAAA AGACGTGACC CAAGCGTGGA GGTAGTAATT TACCCCACGG CAGTTCAGGG CACCGGCGCC GACAAAGACA TCATTCGTGC CATCGAGCTT GCCAACCAGA GGCTTGAAGT GGATGTGCTC CTGCTCACCC GGGGAGGCGG GAGCCTCGAA GACCTCTGGT GCTTCAACAG CGAAGCCCTT GCTCACGCCA TCTACAACAG CACCCTGACC ATAGTGAGCG CGGTGGGCCA TGAGGTAGAT ACCAGCATTG CCGACTTTGT CGCCGATGTC AGAGCACCGA CGCCTTCTGC GGGCGCCGAG CTGCTGTCGG GAGACCAAAG CCACAAGCAG CAAAAACTCG CCGGTGCCCT TGCCAGACTG ACCCAGGGCT GGCGCCATTA CGCCCTTAAA CGTCATTCCG GTCTGATTTC ACTGCAATCC CGGCTCGACC GGCAAGATCC TAAACGCCAG TTACAGCAGC AGTCCCAGCG CCTCGATGAG TTGGAACTGC GGCTGACATC CAGTATTCAG AGACGCCTAT CGTCCCACAC GCTTACCACA GAGCGGTTAA AGGCAAGGCT CGAACGCCAC TCACCGGCCC AGCGCTTGAT GATGGAACAG CAGCGGCTCA CTTACCTCGA TGAAAGACTC AAGGGCGCCA TGGAAGACAG GCTGGAAGAT GCGCAAACAC ACCTTGGGGG GCTCAGCCAC TCACTCGCCA GCGTGTCTCC ACTGGCGACC TTAAGCCGCG GCTACTCCAT CACCCGAGAC GCTGGTGGCA GGGTACTGAC TCAGGCGAGC AGCATGAAAA CCGGCGATAC CATAGAGACT CAACTGGAAC AGGGTTCACT TTTGGCCCGC GTCATTGAGA TCAAGCCGGA GTAA
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Protein sequence | MQVPKNDVYT VSRLNGEVRQ LLEGQLGRIW LTGEISNFSS PSSGHWYLTL KDSHSQLRCA MFKGRNTTVA FKPINGQQVL VRGSISVYEP RGDYQLLIEA MFPAGDGLLA AQFEALKMKL AAEGLFAQDT KRPLPESIQR IGVITSPTGA AIRDVLHVLK RRDPSVEVVI YPTAVQGTGA DKDIIRAIEL ANQRLEVDVL LLTRGGGSLE DLWCFNSEAL AHAIYNSTLT IVSAVGHEVD TSIADFVADV RAPTPSAGAE LLSGDQSHKQ QKLAGALARL TQGWRHYALK RHSGLISLQS RLDRQDPKRQ LQQQSQRLDE LELRLTSSIQ RRLSSHTLTT ERLKARLERH SPAQRLMMEQ QRLTYLDERL KGAMEDRLED AQTHLGGLSH SLASVSPLAT LSRGYSITRD AGGRVLTQAS SMKTGDTIET QLEQGSLLAR VIEIKPE
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