| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2350 |
|---|
| Symbol | |
|---|
| ID | 4604600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2819978 |
|---|
| End bp | 2823859 |
|---|
| Gene Length | 3882 bp |
|---|
| Protein Length | 1293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639781748 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_928225 |
|---|
| Protein GI | 119775485 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCA TCCGTGGAGC TCCTGCACTC TCGGCGTTTA GAGTGCAAAA GCTGATGGAA
GCCTGTGAAA ATGCAGCACT TCCTGTACGC CAAATCTATG CCGAATATAT CCATTTGGCG
GACTTGAACG AGGCGCTCAA TGCTACCGAG CAAGAAAGAC TCGGCAAGAT CCTGACCTAC
GGTCCCGCCA TTGAGCCCCA TGCCCCCACA GGAACCCTCC TGTTTGTCAC TCCCCGCCCC
GGCACCATCT CTCCCTGGTC CTCCAAAGCT ACCGACATCG CTCACAATTG TGGCCTTGAC
AAGATCAAGC GTCTGGAGCG TGGTGTTGCT TACTATGTTG AGTCGGATGC CCTGAGCGAT
GCTCAGACCA AGGAGCTCAA AGCCCTGATC CACGACCGCA TGGTAGAAGT GGTGCTGGCG
AGCTTTGACG ATGCCGCTGT GCTGTTTGCC CACACCGAGC CCAAGCCTTT TACCAGCGTC
AACATCCTCG GCGAAGGCCG CGCCGCGCTG GAAGTGGCCA ACCGCAACAT GGGTCTGGCA
CTGGCGGAAG ATGAAATCGA CTATCTGGTG GAAAACTTCA CCCGCCTGGG TCGTAACCCC
AACGACATCG AGCTGATGAT GTTTGCCCAG GCAAACTCTG AGCACTGTCG TCACAAGATT
TTCAACGCCG ATTGGACCAT CGACGGCGCA GAGCAGCCCA AGTCGCTGTT CAAAATGATC
AAAAACACCT TCGAAACCAC CCCGGACAAT GTGCTGTCTG CCTATAAGGA TAACGCCGCC
GTGATGGTGG GTACCGAGGC TGGCCGCTTC TTCCCGGACG CCGACGGTGT TTACAACTAC
CATCAGGAGC CGGTTCATAT CCTGATGAAG GTGGAAACCC ACAACCACCC AACTGCTATC
AGCCCCTACC CGGGTGCTGC CACCGGCTCC GGTGGTGAAA TCCGTGACGA AGGTGCAACC
GGCCGCGGCG CCAAGCCAAA GGCGGGTTTG ACCGGTTTCA GCGTATCCAA CCTGAAGATC
CCGGGCTTTG TGCAGCCTTG GGAAGGCAAC TATGGCAAGC CAGACCGCAT AGTAACAGCG
CTGGATATCA TGACCGAAGG CCCTCTGGGC GGTGCTGCCT TTAACAACGA GTTTGGCCGT
CCGGCGCTTT TGGGTTACTT CCGTACCTAC GAGCAGGAAG TATCGAGCCA CAACGGCGTA
GAAGTGCGTG GTTACCACAA GCCCATCATG CTCGCCGGTG GTATTGGTAA CATCCGCGAA
GACCATGTGC AGAAAGGTGA AATCACCGTT GGCGCCAAGC TGATAGTGCT GGGTGGCCCT
GCGATGAACA TTGGCCTTGG CGGCGGCGCC GCTTCTTCCA TGGCCTCGGG CCAGTCCAGC
GAAGATCTCG ATTTTGCTTC TGTACAGCGC GACAACCCAG AGATGGAGCG TCGCTGTCAG
GAAGTCATCG ACCGCTGCTG GCAGATGGGT GACAAGAACC CTATCCAGTT TATCCACGAC
GTGGGTGCTG GTGGTTTGTC CAACGCCCTG CCTGAGCTGG TGAACGATGG CGACCGCGGT
GGCCGTTTCG AGCTGCGCAA GGTGCTGTGC GACGAACGCG GCATGAGCCC GCTGGAAATC
TGGTGTAACG AGTCCCAGGA GCGTTATGTG CTGTCTGTGG CTGCCGAAGA TCTCGACACC
TTCGCCGCCA TCTGTGAGCG TGAGCGTGCG CCATTTGCCG TAGTGGGTGA AGCCACTGCC
GAGCCGCACT TAAGCCTCAA TGACGAGCAT TTCGGTAACA CCCCAATCGA TTTGCCACTG
GAAGTGCTTT TGGGCAAGCC GCCCAAGATG AGCCGCCAGG TGGAAAGCAA AAAGGCGGTA
AGTCCTGCAC TGGATCAGAG CAAGATTGCC GTAGGTGAAG CCGTCAAGCG CGTACTGTCA
CTGCCAACTG TGGCCGACAA GACCTTCCTT ATTACCATCG GTGACCGCAC CGTGACAGGC
CTTGTGGCCC GCGACCAGCT GGTTGGCCCA TGGCAGGTGC CTGTGGCTGA CTGCGCCGTA
ACCGCCGCCA CCTTCGACAC CTATGCCGGT GAAGCCATGT CCATGGGCGA GCGCACGCCG
CTGGCACTGC TGGACTTTGG CGCATCTGCC CGCATGGCGG TGGCCGAGTC CATTATGAAC
ATCGCCGGTG CCGACATTGG CTCGTTCAAG CGCATTAAGC TCTCTGCCAA CTGGATGGCC
GCTGCCGGTC ACCCGGGTGA AGACGCAGGT CTCTATGAAG CGGTAAAAGC CGTGGGCGAA
GAGCTGTGTC CTGAGCTTGA ACTCACCATC CCTGTGGGCA AGGACTCCAT GTCCATGAAG
ACCGCCTGGG AAGTGAACGG CGAGAAGAAA GCCGTGACCG CGCCTATGAG CCTTATTATC
TCTGCCTTCG GCGCAGTGAA TGATGTGCGC AATACCGTGA CCCCGGAGCT TCGCTGTGAC
AAGGGTGATA CCAGCATCCT CTTTATCGAC CTTGCCAATG GTCAAAACCG CCTCGGTGGT
TCGTGCCTGG CGCAGGTGTT TGGTGAGCTG GGTGATGTGG CCCCGGATCT GGATAACGCC
GCCAGTCTGC GCGGTTTCTT CGAGACCATG CAGAAGCTCG TTGCCGCCAA GCAGGTGATG
GCATACCACG ACAAGAGTGA CGGTGGTCTG TTCACTACGC TCGTGGAAAT GGCCTTTGCC
GGTAACACGG GTCTGGACAT CAACCTGGCT GGAATCGCAG GCTCGGATCT TGAGCGTCTC
TTCAACGAAG AGCTCGGCGG TGTTATTCAG GTAAGTAAAG CCGATGAAGC TGCTGTACGC
AGCGCCTTCG AAGCCGCCGG TCTTGCCGTA CACGCCGTTG CCAAGTTGAA CACTGATGGT
CAGGTGCGTA TCCACGATGG CGAGCGTCTG GTGTTTGAAG ACAGCCGCGT AGCACTGCGC
ACTGTGTGGT CCGAGACTAC CTACCGCATG CAGGCCCTGC GTGATAACCC TGAGTGTGCC
CGCCAGGAGT TTGAACTTAA GCAGAAGGCC GACGAGCCGG GTCTGACCGT GAAGCTTGGC
TTCGACCCAA GCGAAGACGT GGCAGCGCCT TATATCCTCA AGGGCGCCGC GCCCAAGATG
GCGATTCTGC GCGAGCAGGG CGTAAACTCC CATGTGGAGA TGGCGGCCGC GTTTGATAGA
GCCGGTTTTG AGAGCCGCGA CGTGCACATG TCTGACATCC TCTCTGGCCG TATCAGCCTG
GAAGAATTCC AGGGTCTGGT AGCCTGTGGC GGCTTCTCTT ACGGTGACGT GCTCGGCGCA
GGTGAAGGCT GGGCCAAGTC CATCCTCTTT AACCAGCGTG CCCGCGATGA GTTCAGCCGC
TTCTTCGAGC GCGACAGCAG CTTCGCCCTC GGTGTATGTA ACGGTTGTCA GATGATGTCG
AACCTTAAAG ACATCATCCC CGGTGCCGAG CACTGGCCAC GTTTCGTGCG TAACCGCTCT
GAGCGCTTTG AAGCCCGCTT CAGTCTGGTA GAAGTGCAGT CGAGTCCATC GCTGTTCTTC
TCTGGTATGG AAGGCTCACG CATGCCAATC GCCGTATCTC ACGGTGAAGG TTTTGCCGAG
TTCGCCAACG CCGAAGCGTT GGCCCGCGCC GAAGCCACAG GCACAGTGGC GCTGCGTTAC
GTGAACGGTC ATGGCGAAAT CGCCACCCAG TACCCGCAGA ACCCCAATGG CTCGCCAAAC
GGCCTGACCG GTATCACCAC CCTGGATGGC CGCGTGACCA TCATGATGCC GCACCCTGAG
CGGGTATTCC GCACTGTGGC CAACTCCTGG CACCCGGACA ACTGGGGCGA GGACAGCCCA
TGGATGCGCA TGTTCCGTAA CGCCCGGGTG AAACTGGGTT AA
|
|---|
| Protein sequence | MEIIRGAPAL SAFRVQKLME ACENAALPVR QIYAEYIHLA DLNEALNATE QERLGKILTY
GPAIEPHAPT GTLLFVTPRP GTISPWSSKA TDIAHNCGLD KIKRLERGVA YYVESDALSD
AQTKELKALI HDRMVEVVLA SFDDAAVLFA HTEPKPFTSV NILGEGRAAL EVANRNMGLA
LAEDEIDYLV ENFTRLGRNP NDIELMMFAQ ANSEHCRHKI FNADWTIDGA EQPKSLFKMI
KNTFETTPDN VLSAYKDNAA VMVGTEAGRF FPDADGVYNY HQEPVHILMK VETHNHPTAI
SPYPGAATGS GGEIRDEGAT GRGAKPKAGL TGFSVSNLKI PGFVQPWEGN YGKPDRIVTA
LDIMTEGPLG GAAFNNEFGR PALLGYFRTY EQEVSSHNGV EVRGYHKPIM LAGGIGNIRE
DHVQKGEITV GAKLIVLGGP AMNIGLGGGA ASSMASGQSS EDLDFASVQR DNPEMERRCQ
EVIDRCWQMG DKNPIQFIHD VGAGGLSNAL PELVNDGDRG GRFELRKVLC DERGMSPLEI
WCNESQERYV LSVAAEDLDT FAAICERERA PFAVVGEATA EPHLSLNDEH FGNTPIDLPL
EVLLGKPPKM SRQVESKKAV SPALDQSKIA VGEAVKRVLS LPTVADKTFL ITIGDRTVTG
LVARDQLVGP WQVPVADCAV TAATFDTYAG EAMSMGERTP LALLDFGASA RMAVAESIMN
IAGADIGSFK RIKLSANWMA AAGHPGEDAG LYEAVKAVGE ELCPELELTI PVGKDSMSMK
TAWEVNGEKK AVTAPMSLII SAFGAVNDVR NTVTPELRCD KGDTSILFID LANGQNRLGG
SCLAQVFGEL GDVAPDLDNA ASLRGFFETM QKLVAAKQVM AYHDKSDGGL FTTLVEMAFA
GNTGLDINLA GIAGSDLERL FNEELGGVIQ VSKADEAAVR SAFEAAGLAV HAVAKLNTDG
QVRIHDGERL VFEDSRVALR TVWSETTYRM QALRDNPECA RQEFELKQKA DEPGLTVKLG
FDPSEDVAAP YILKGAAPKM AILREQGVNS HVEMAAAFDR AGFESRDVHM SDILSGRISL
EEFQGLVACG GFSYGDVLGA GEGWAKSILF NQRARDEFSR FFERDSSFAL GVCNGCQMMS
NLKDIIPGAE HWPRFVRNRS ERFEARFSLV EVQSSPSLFF SGMEGSRMPI AVSHGEGFAE
FANAEALARA EATGTVALRY VNGHGEIATQ YPQNPNGSPN GLTGITTLDG RVTIMMPHPE
RVFRTVANSW HPDNWGEDSP WMRMFRNARV KLG
|
|---|
| |