Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2348 |
Symbol | |
ID | 4604598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2816153 |
End bp | 2817292 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781746 |
Product | cytochrome bd-I oxidase subunit II |
Protein accession | YP_928223 |
Protein GI | 119775483 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.245309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.859563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT ACGAAGTATT GCGTTTTATC TGGTGGGCCC TGGTCGGCGT GCTCTTTATC GGCTTCGCTG TCACCGACGG TTTCGACATG GGTGTGGGTG CCTTGCTGCC AGTTATCGGC AAGGATGACA CCGACAGAAG AGTCATGATC AACACCGTTG CCCCCCACTG GGACGGTAAC CAGGTATGGC TTATCACCGC CGGTGGCGCG CTCTTTGCCG CCTGGCCCAT GGTCTATGCC GTGTCTTTCT CGGGCTTCTA TGTGGCCATG GTGATTGTGC TGCTGGCGCT GTTTTTGCGT CCGGTGGGCT TTGACTATCG CTCCAAGATT GAAGCACCAA AATGGCGTAA GTCCTGGGAC TGGGCGCTGT TTGTGGGCTC CTTCGTGCCG CCGCTGATTA TCGGTGTTGC CTTTGGTAAC CTGCTGCAGG GCGTACCCTT CAATTTTGAT GAGTTCCTGC GTGCCAAATA CCACGGTGGC CTGTTTGGTC TGCTTAACCC CTTCGGTCTG TTGGCCGGCT TGGTTAGCGT GAGCATGTTT ATGATGCAGG GCGCAACCTG GCTGCAGATG AAGACTGAAG GCGAGCTGCG GGTGCGTGCC ACCAATGCCG CTCAGCTGCT GGCACTTCTG CTGGTCGTAC TGTTTGCCGC GGCTGGTTTC TGGGTCGCCA ATGGCATCGA TGGTTATGTG ATTACCTCGG CTATCGACAC CCACGCTGCC TCTAATCCAG TGGGTAAAAC CGTTGAGTTG GTAAGTGGTG CCTGGATGGC GAACTATCAG ACGTACCCCA TCACCATGGC TTTCCCTGTA CTGGGTCTGG CGATGCCGGT GCTGGTGATT CTTGCAAGCC GTTTTAACCG CAGTGGTTTT GCCTTCCTGT TCAGCTCGCT GGCGGTTGCC GGTGTGATCC TGACCTGCGG CGCGGCCATG TTCCCGTTCG TGATGCCATC TTCACTGGAG CCGGGCGTGA GCCTGACCAT GTGGGATGCC ACCGCCAGTG AAATGACCCT GACCGTGATG ACCTGGGCTG CCATTATCTT TGTTCCGATT GTGCTCTCGT ACACCATCTG GACTTACTAC AAGATGTATG GTCGTCTGAG CCGTCAGTTC ATCGACAACA ACAAGCATTC ACTGTACTGA
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Protein sequence | MFDYEVLRFI WWALVGVLFI GFAVTDGFDM GVGALLPVIG KDDTDRRVMI NTVAPHWDGN QVWLITAGGA LFAAWPMVYA VSFSGFYVAM VIVLLALFLR PVGFDYRSKI EAPKWRKSWD WALFVGSFVP PLIIGVAFGN LLQGVPFNFD EFLRAKYHGG LFGLLNPFGL LAGLVSVSMF MMQGATWLQM KTEGELRVRA TNAAQLLALL LVVLFAAAGF WVANGIDGYV ITSAIDTHAA SNPVGKTVEL VSGAWMANYQ TYPITMAFPV LGLAMPVLVI LASRFNRSGF AFLFSSLAVA GVILTCGAAM FPFVMPSSLE PGVSLTMWDA TASEMTLTVM TWAAIIFVPI VLSYTIWTYY KMYGRLSRQF IDNNKHSLY
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