| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2335 |
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| Symbol | |
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| ID | 4604585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2800658 |
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| End bp | 2801716 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639781733 |
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| Product | putative sugar-phosphate nucleotide transferase |
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| Protein accession | YP_928210 |
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| Protein GI | 119775470 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0321237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.579139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA AGTGGAAATC TGTAACTCTT TCAGCGACAT CTACCATCCG CGAGGCGCTT
GAAATTATCA ACAGAGAAGC CTTAAGAGTA GCGCTGGTGG TTGATAAAGA TCGAAATCTT
GTGGGCGTTG TCACCGATGG TGATATTCGA AGAGGTCTGC TAAAGAACTT ATCTCTTTCA
GATGGCATCG CTTTGGTAAT GAATACCAAT CCAACCACGG CAGAATCGGG TACGCCGAAG
CAAGACCTCG TTGAATTGAT GCAACGCAAA GGGATTATCT CAGTACCACT GTTGAAAAAC
GGTAAAATCG TCGGGCTGGA AACTCTCCAA AGTGCGCTGA CCAGACCTAC TTACCCCAAC
CCTGTTCTGA TCATGGCGGG CGGCTTTGGC ACCAGGCTAA AACCTTTAAC CGATGACTGT
CCAAAACCAA TGCTTAAGAT AGGTCAACGC CCCATTCTTG AAACCTTGAT TATGCAAATG
GTGAAATGTG GTTTTGAGCA TTTTTACGTA TCAACCCATT ACATGCCTGA AAAAATCCAT
TCTCATTTTG GTGATGGTAA AAATTTTGGT GCGAATATCA CCTATGTTCA CGAAGATGTC
CCTCTCGGAA CGGGAGGTGC GTTAGGATTA GTGAAAGATA AACTACAGGA TGACCTGCCG
TTAATCGTGA TCAATGGGGA TGTATTAACC ACAGTCAACT TTGAGCGACT TCTTGAGTTC
CATTTAATCA ATCAAGCAGA TGCGACAATG TGCGTGCGGG AATATGAGTA TCAGGTGCCC
TACGGCGTAA TCACTACCAA GGGAAAGAAA ATCTCCGGAA TGGTGGAAAA GCCTGTACAG
CATTTCTTTG TAAATGCAGG GATCTATGTG GTATCCCCTG CTGTATATAA ATCCGTCGAA
CCAAACAGTC ACATAGATAT GCCAGCTTTA CTTGAAAAAC ACATGCATGC ACGTGACAGA
GTCTACACAT TCCCTATCCA TGAATATTGG CTGGATATTG GTCGAATGGA TGAGTTCAAC
AAAGCACAAT CTGACATAGA AGTGTTAGGG ATTAATTAA
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| Protein sequence | MTEKWKSVTL SATSTIREAL EIINREALRV ALVVDKDRNL VGVVTDGDIR RGLLKNLSLS
DGIALVMNTN PTTAESGTPK QDLVELMQRK GIISVPLLKN GKIVGLETLQ SALTRPTYPN
PVLIMAGGFG TRLKPLTDDC PKPMLKIGQR PILETLIMQM VKCGFEHFYV STHYMPEKIH
SHFGDGKNFG ANITYVHEDV PLGTGGALGL VKDKLQDDLP LIVINGDVLT TVNFERLLEF
HLINQADATM CVREYEYQVP YGVITTKGKK ISGMVEKPVQ HFFVNAGIYV VSPAVYKSVE
PNSHIDMPAL LEKHMHARDR VYTFPIHEYW LDIGRMDEFN KAQSDIEVLG IN
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